DR908116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIM (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIL (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL +I N E R + P S ++ + L +M+ GY+ +F+ D R GKI V+LLGRVN C +T R + R+ + Y R LP+++ G ++++T GV+ H+EA R +GG LGY + Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGY---TVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGY 488 L +AL AI NAE R K V + P S + + L +++ GYI +F+ D R GKIK++LLGR+N + R V+ RE+ + R LP G ++++TP GVL H+EA+ + GG +L Y Sbjct: 7 LANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGVIKPRYPVKHRELAEFPEWLKRYLPAYNIGVIIVSTPYGVLSHKEAVEKQTGGVLLAY 131
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METVS (30S ribosomal protein S8P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ L +M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ +E E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METVA (30S ribosomal protein S8P OS=Methanococcus vannielii GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E GK L+P S ++ L +M+ +GYI +F+ + + G KV+L+G++N C A+ R V+ +E E + R LP + +G ++++TP G++ H+EA VGG+++ Y + Sbjct: 7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 3 Query: 120 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 +L++AL ++ NAE RG V + P S ++ + L +M+ GY+ +F+ R GK V+LLGR+ND A+ R V+ E++ + + LP RQ G +++TT GV+ H EA VGG ++ Y + Sbjct: 6 VLSNALMSVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGKYVVQLLGRINDIGAIKPRFHVKVDELQKWEEKYLPARQVGILILTTSKGVVSHLEARENRVGGILVAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_STAMF (30S ribosomal protein S8P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 48/127 (37.80%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIE---GYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I NAE R K+ + P S ++ + L +M+ GYI +F+ D R GKIKV+LLGR+N + R V+ R++E + + LP G ++++TP GVL H+EA+ + GG +L Y + Sbjct: 7 LANALATIQNAEMRAKSEALIWPASKLIINVLRVMQREGYIGEFEYIDDGRWGKIKVQLLGRINKTGVIKPRFPVKLRDLERMPHWLRKYLPAYNIGILILSTPHGVLSHKEAIAKKTGGVLLAYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THENV (30S ribosomal protein S8P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 46/125 (36.80%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 120 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 +L++AL I NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND + R V+ REI + + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 LLSNALIQIKNAEAMGKRQVAIWPVNKLIYYTLRVLQRHGYVGEVEYIDDGRGGKYVVQLLGKINDIGPIKPRYPVKYREIVQWEQKFLPARQIGILVISTNQGVMSHVEAKEKKIGGVLLAYVY 130 The following BLAST results are available for this feature:
BLAST of DR908116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908116 ID=DR908116; Name=DR908116; organism=Citrus sinensis; type=EST; length=719bpback to top |