DR908116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 120 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 +L++AL I NAE GK V + P++ ++ L +++ GY+ + + D R GK V+LLG++ND + R V+ REI + + LP RQ G +VI+T GV+ H EA R +GG +L Y + Sbjct: 6 LLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.796e-17 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 129 DALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 +AL A+ NAE G + P S + S L + RGYI F D + G+ +VEL G +N+C + R A E E + R LP R +G +V+TT G++ H EA + VGGQV+ Y + Sbjct: 9 NALSALNNAESVGHLEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_META3 (30S ribosomal protein S8P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.264e-17 Identity = 41/124 (33.06%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N ER GK +QP S ++ +M+ +GY+ +F+ + + G KVEL G +N C A+ R V+ E E + R LP + +G ++++TP G++ H+EA +GG+++ Y + Sbjct: 7 LANALNHLSNCERVGKDVAYVQPASKLIGRVFKVMQDKGYMGNFEYIEDGKAGIYKVELTGHINKCGAVRPRYAVKKTEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKSNGLGGRLISYIY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 LND + +I NA R GK + +P + ++ L +M+ YIK F++ D R GK K+ L +N+C + R V+ +E Y R LP +G +++TT GV+ + EA + +GG++L Y + Sbjct: 6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N E RG + P S ++++ L IM+ GY+ +F+ D R GKI+V LLGR+N C A+ R V R+ + + R LP++ G ++I+T G++ H+EA+++ VGG + Y + Sbjct: 7 LANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCGAIKPRVSVSYRDLLVLPEHLRRFLPSKDVGILIISTSQGLMTHKEAIQKRVGGIAIAYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRARE---IEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I N E R + P S ++ + L M+ GYI +F+ D R GKI V+LLGR+N C + R ++ ++ + Y R LP+++ G ++I+T GV+ H++A+R +GG LGY + Sbjct: 7 LANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQKEGYIGEFEFIDDGRSGKIVVQLLGRINKCGPIAPRYPLKYKDLLTLPDYVRRYLPSKEIGVLIISTNKGVMTHKDAIRERIGGVALGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAR---EIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL + N E R + P S ++ S L +M+ GYI +F+ D R GKI V+LLGR+N C ++ R + + Y + LP+++ G ++I+TP GV+ H + +R +GG LGY + Sbjct: 7 LANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 47/125 (37.60%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 120 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 IL++AL I NAE GK V + P++ + L +++ GY+ + + D R GK V+LLG++ND + R V+ REI + + LP RQ G +VI+T GV+ H EA + +GG +L Y + Sbjct: 6 ILSNALIQIKNAEVMGKRQVTIWPVNKLTYYTLRVLQRYGYVGEIEYVDDGRGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVVSHIEAKEKKIGGVLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_METAC (30S ribosomal protein S8P OS=Methanosarcina acetivorans GN=rps8p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 L +AL I NAE GK++ ++P S + + L +M+ GYI DF+ D + G V L+GR+N C A+ R V E + + LP + +G +++TT GV+ EA + +GGQ+L Y + Sbjct: 7 LANALSTIKNAEAIGKSSCVVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTASFERWEKQFLPAKNFGALIVTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of DR908116 vs. ExPASy Swiss-Prot
Match: RS8_THEVO (30S ribosomal protein S8P OS=Thermoplasma volcanium GN=rps8p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16 Identity = 41/124 (33.06%), Postives = 70/124 (56.45%), Query Frame = 3 Query: 123 LNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRALTYRQDVRAREIEGYTVRALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 494 LND + +I NA R G+ + +P + ++ L +M+ YIK F++ D R GK K+ L +N+C + R V+ +E Y R LP +G +++TT GV+ + EA + +GG++L Y + Sbjct: 6 LNDVINSIKNASRLGRREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYESRYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129 The following BLAST results are available for this feature:
BLAST of DR908116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908116 ID=DR908116; Name=DR908116; organism=Citrus sinensis; type=EST; length=719bpback to top |