DR908115

Overview
NameDR908115
Unique NameDR908115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEF 266
            N  GRLS +EIEKM+ +AEK+KS D+   K+ E K  LE Y  ++ +TV D  + +KL  + K KIE A+  A+Q L+  + + AD++
Sbjct:  509 NSIGRLSTEEIEKMISDAEKFKSSDDAFAKRHEQKQKLEAYVASVESTVTDPVLSAKLKKSAKDKIEAALSDALQTLEIEE-SSADDY 595          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 317
            N  GRLS +EIEKMV +AE++K+ DE   KK EA+  LE+Y  ++  TV D  + SKL    K KIE A+  A+  L        D   D++++ E     ++ K
Sbjct:  509 NAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIE-----DPSADELRKAEVGLKRVVTK 608          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEAD 260
            N  GRLS DEIEKMV +AE++K+ DE   KK EA+  LE+Y  ++   V D  + SKL    K KIE A+  A+  L+    +  D
Sbjct:  509 NAVGRLSSDEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQQVTDPVLSSKLKRGSKTKIESALSDALASLEIQDASTDD 594          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 317
            N  GRLS +EIEKMV +AE++K+ DE   KK EA+  LE+Y  ++  TV D  + SKL    K KIE A+  A+  L        D   D++++ E     ++ K
Sbjct:  509 NAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIE-----DPSADELRKAEVGLKRVVTK 608          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: DNAK_OENOB (Chaperone protein dnaK OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 3
Query:   12 GRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            G LS+DEI KMV++AE  +  D++ K++V+  N ++   ++   T+ D  +G KL  +DKK ++DA+D+  +  DSN +   +  ++K   LE     +  K+YQ
Sbjct:  472 GNLSEDEINKMVKDAESNEEADKKKKEEVDLHNQVDQLIFSSEKTLSD--VGDKLGDSDKKPVQDALDELKKAKDSNNI---ETLKEKKDALEKAAQALAVKLYQ 571          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: DNAK_NITMS (Chaperone protein dnaK OS=Nitrosopumilus maritimus (strain SCM1) GN=dnaK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.787e-11
Identity = 35/106 (33.02%), Postives = 64/106 (60.38%), Query Frame = 3
Query:    9 KGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            K +LS++EIEK+ ++AEK+  ED++ K+K++ KN  E+Y Y     V  + +  K++     KI DA+ +  + LD     E +E + K++ L+SI N +  ++Y+
Sbjct:  482 KTKLSEEEIEKLKEDAEKFSEEDKKKKEKIDLKNEAESYIYTTEKLVNHD-LKDKISQEQGIKITDAVKEVKEVLDK----EPEELKPKLEALQSIVNEVTTELYK 582          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 34/105 (32.38%), Postives = 62/105 (59.05%), Query Frame = 3
Query:   12 GRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            G LS+DEI +MV+EAE+   EDE+ KK +E KN  ++  ++   ++ +   G K++P DK  IE+A+++  +   S+ + +AD  + K+  L  +   +   MY+
Sbjct:  499 GGLSEDEINRMVREAEEKAQEDEKRKKFIEVKNQADSLVHSTEKSLTE--YGDKISPEDKSAIENAVNELKEVSKSDNIDDADSIQQKVTNLSQLSMKLGEAMYK 601          
The following BLAST results are available for this feature:
BLAST of DR908115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
HSP75_CANAL7.630e-1242.05Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]
HSP76_YEAST2.220e-1138.10Heat shock protein SSB2 OS=Saccharomyces cerevisia... [more]
HSP75_ZYGRC2.220e-1143.02Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
HSP75_YEAST2.220e-1138.10Heat shock protein SSB1 OS=Saccharomyces cerevisia... [more]
DNAK_OENOB2.220e-1133.33Chaperone protein dnaK OS=Oenococcus oeni (strain ... [more]
DNAK_NITMS3.787e-1133.02Chaperone protein dnaK OS=Nitrosopumilus maritimus... [more]
DNAK_WOLPP6.459e-1132.38Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16243 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908115 ID=DR908115; Name=DR908115; organism=Citrus sinensis; type=EST; length=610bp
CTAATGACAAAGGAAGACTTTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAGAAGGTTGA
GGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGA
AGGACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATT
GAAGATGCGATCGACCAGGCCATCCAATGGTTGGACAGCAACCAGCTTGC
AGAGGCTGATGAGTTTGAGGACAAGATGAAGGAATTGGAGAGCATCTGCA
ACCCCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTGACATGGGTGGT
GCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCCCCAAGAT
TGAGGAGGTCGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTGTCTGTTG
AGGGTTAAGTTGGTAGGGTGATTAGATGTTTCGGAATTTTAATTTTATTT
TCATGTTTTGACTTTTGGGTTTTGATTGATCTTTTACAAGTCTGTTCAAA
GCCCATTGCAAGTGTTCTCTATGTTTTCTCAATATACTTTTTTTCATCTA
AAAAAAAAAA
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