DR908115

Overview
NameDR908115
Unique NameDR908115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 60/107 (56.07%), Postives = 80/107 (74.77%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 323
            ND+    + +I++MV EAEKYKSEDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+NQ AE +E+E K KELE I NPI+ KMY
Sbjct:  508 NDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 56/109 (51.38%), Postives = 89/109 (81.65%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K+K++A+N+LE Y YNM+N + D +K+  KL   +K+KIE A+ +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  537 NDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 57/109 (52.29%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K+K++A+NALE Y YNM+N + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  537 NDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 57/109 (52.29%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:  164 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 272          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 57/109 (52.29%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:  538 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 646          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 56/109 (51.38%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNM+N + D +K+  KL   +K+KIE A+ +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:   40 NDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 148          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXSGA------GPKIEEVD 413
            NDKGRLSK+EIEKMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ +E+  SKL  ++ +++  A D+ I WLDSNQ A  +EF D+ KELES  NPI+ K YQ                    A      GP +EEVD
Sbjct:  503 NDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQAGATPSGAAGAAPGGFPGGAAPEPSNDGPTVEEVD 645          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 54/109 (49.54%), Postives = 91/109 (83.49%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            N+KGRLS++EI++MV+EAE++  ED++ K++++A+N LE Y YNM+NTV D +K+  KL   +K+K+E+A+ +A++WLD NQ AE +++E+K+KE+E++CNPI++ +YQ
Sbjct:  534 NEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQ 642          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 54/109 (49.54%), Postives = 91/109 (83.49%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            N+KGRLS++EI++MV+EAE++  ED++ K++++A+N LE Y YNM+NTV D +K+  KL   +K+K+E+A+ +A++WLD NQ AE +++E+K+KE+E++CNPI++ +YQ
Sbjct:  534 NEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQ 642          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 56/108 (51.85%), Postives = 86/108 (79.63%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS +EI++MV +AEKYK+EDEE+KK++EA+N+LENY Y ++++++D+KI  KL P++ +    +I   ++WL+ NQLA  +E+E K KE ES+C PI++K+YQ
Sbjct:  518 NDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQ 625          
The following BLAST results are available for this feature:
BLAST of DR908115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
HSP70_BRELC6.212e-3056.07Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
BIP_SPIOL6.212e-3051.38Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP_SOLLC6.212e-3052.29Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP8_TOBAC6.212e-3052.29Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP4_TOBAC6.212e-3052.29Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP3_TOBAC6.212e-3051.38Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP72_CANAL8.114e-3047.55Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
BIP3_MAIZE8.114e-3049.54Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP2_MAIZE8.114e-3049.54Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
HSP70_PLACB1.060e-2951.85Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16243 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908115 ID=DR908115; Name=DR908115; organism=Citrus sinensis; type=EST; length=610bp
CTAATGACAAAGGAAGACTTTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAGAAGGTTGA
GGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGA
AGGACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATT
GAAGATGCGATCGACCAGGCCATCCAATGGTTGGACAGCAACCAGCTTGC
AGAGGCTGATGAGTTTGAGGACAAGATGAAGGAATTGGAGAGCATCTGCA
ACCCCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTGACATGGGTGGT
GCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCCCCAAGAT
TGAGGAGGTCGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTGTCTGTTG
AGGGTTAAGTTGGTAGGGTGATTAGATGTTTCGGAATTTTAATTTTATTT
TCATGTTTTGACTTTTGGGTTTTGATTGATCTTTTACAAGTCTGTTCAAA
GCCCATTGCAAGTGTTCTCTATGTTTTCTCAATATACTTTTTTTCATCTA
AAAAAAAAAA
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