DR908115

Overview
NameDR908115
Unique NameDR908115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 57/109 (52.29%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++E+K+KE+E+ICNPII  +YQ
Sbjct:  161 NDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQ 269          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29
Identity = 55/108 (50.93%), Postives = 84/108 (77.78%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS+ EIE+MV+EA KY++ED++  ++++AKN LENYA++M+N V D  +  K+  ADKK I  A+++A++WL++NQ A  +E+E + KELE++C PI+  MYQ
Sbjct:  508 NDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQ 615          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29
Identity = 56/107 (52.34%), Postives = 86/107 (80.37%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 323
            NDKGRL+ ++IEKMV++AE +K++DE  ++ VE+KN LENYAY +R+T+KD+KI +KL+  D+K +E+  D+AI WL +N  A  +E+E  MK+LE++C+PII+K+Y
Sbjct:  504 NDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29
Identity = 56/109 (51.38%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  537 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.384e-29
Identity = 56/109 (51.38%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL   +K+KIE A  +A++WLD NQ AE +++E+K+KE+E++CNPII  +YQ
Sbjct:  161 NDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 269          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29
Identity = 59/141 (41.84%), Postives = 93/141 (65.96%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXS----GAGPKIEEVD 413
            NDKGRLS++EI++MV+EAEKYK EDE+ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I  A++W+++NQLAE DE+EDK+K +E +CNP++ K+YQ                  +     +GP +EEVD
Sbjct:  506 NDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQSGAAPGGPDMSGGFPGGAAPPPQSSGPTVEEVD 646          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29
Identity = 60/107 (56.07%), Postives = 83/107 (77.57%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 323
            NDKGRLSK+EIE+M+ EAEKYK+EDE    +++AKN LE+YAY+++NT+ + K+  +++  DKKKIED I + I WLD+NQ AE DE+E + KELE+I NPI+   Y
Sbjct:  373 NDKGRLSKEEIERMLAEAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAY 477          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 56/101 (55.45%), Postives = 80/101 (79.21%), Query Frame = 3
Query:   24 KDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            KD+IE+MV+EAE YK ED++ + ++ AKN+LE YA+ M+ T+ +E I SK++  D+KKI D +D+ ++WLD+N LAE DEFE + KELES+CNPII K+YQ
Sbjct:    1 KDDIERMVKEAESYKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQ 101          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 56/109 (51.38%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            N+KGRLS++EI++MV+EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL   +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  536 NEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of DR908115 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 56/109 (51.38%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 326
            N+KGRLS++EI++MV+EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL   +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  536 NEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
The following BLAST results are available for this feature:
BLAST of DR908115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
BIP1_TOBAC1.060e-2952.29Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
HSP70_TRYCR1.384e-2950.93Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HS7C2_DICDI1.384e-2952.34Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
BIP5_TOBAC1.384e-2951.38Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP2_TOBAC1.384e-2951.38Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
HSP70_THEAN1.808e-2941.84Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_PENCI1.808e-2956.07Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
MAG29_DERFA6.869e-2955.45Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
BIP2_ARATH6.869e-2951.38Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH6.869e-2951.38Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16243 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-35_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908115 ID=DR908115; Name=DR908115; organism=Citrus sinensis; type=EST; length=610bp
CTAATGACAAAGGAAGACTTTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAGAAGGTTGA
GGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGTGA
AGGACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGATT
GAAGATGCGATCGACCAGGCCATCCAATGGTTGGACAGCAACCAGCTTGC
AGAGGCTGATGAGTTTGAGGACAAGATGAAGGAATTGGAGAGCATCTGCA
ACCCCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTGACATGGGTGGT
GCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCCCCAAGAT
TGAGGAGGTCGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTGTCTGTTG
AGGGTTAAGTTGGTAGGGTGATTAGATGTTTCGGAATTTTAATTTTATTT
TCATGTTTTGACTTTTGGGTTTTGATTGATCTTTTACAAGTCTGTTCAAA
GCCCATTGCAAGTGTTCTCTATGTTTTCTCAATATACTTTTTTTCATCTA
AAAAAAAAAA
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