DR908105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34 Identity = 81/197 (41.12%), Postives = 114/197 (57.87%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT--STVVQLQGAIKF----NGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPY Y ALEP I E M LHH KHH YV N N A+E+ + ++ + V Q+ I+ NGGGH+NH++FW+ L+P + + AI+ FGS + +A GSGW WL +D E K L V +TANQD +++ L P+L +DVWEHAYYL Y+NV+P+Y+K + V+NW + +Y Sbjct: 8 LPYAYDALEPYIDAETMTLHHDKHHATYVANANAALEKHPEIGENLEVLLADVEQIPADIRQSLINNGGGHLNHALFWELLSPEKT----KVTAEVAAAINEAFGSFDDFKAAFTAAATTRFGSGWAWLVVDKEGK-LEVTSTANQDTPISQG--LKPILALDVWEHAYYLNYRNVRPNYIKAFFEVINWNTVARLY 197
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_METTH (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum GN=sod PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34 Identity = 79/188 (42.02%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 555 LPY Y ALEP IS E + +HHQKHHQAYV N + +L +A ++ T V ++ A+K F+ GG+V H FW N+ P E GGEP L I+ FGS E ++ S + +GSGW L RL + + V P LL +DVWEHAYY+ Y+NV+PDY++ WN++NWK Sbjct: 14 LPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEAR---ESDTDVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGEPS-GKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_PIG (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Sus scrofa GN=SOD2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34 Identity = 78/147 (53.06%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 34 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 474 I+ +IMQLHH +HH AYV N N E+ +AL K D + V LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS E +K++A +QGSGW WLG + E RL + +NQDPL LVPLLGIDV Sbjct: 2 INAQIMQLHHSEHHAAYVNNLNVVEEKYQEALKKGDVTAQVALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLVPLLGIDV 144
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_PYRAE (Superoxide dismutase [Fe] OS=Pyrobaculum aerophilum GN=sod PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34 Identity = 77/184 (41.85%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 LPY Y+ALEP IS EIMQLHHQKHHQ YV N A+E+L + + + + F+ GH+ HSIFW N+AP +GGG+ P + I+ FGS E ++ S ++G GW L + ++L++ + + A LL +DVWEHAYYLQYKN + Y+ N WNV+NW Sbjct: 12 LPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRAVLRDLSFHLNGHILHSIFWPNMAPPGKGGGK-PGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHN--LMHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNVVNW 192
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_MYCKA (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium kansasii GN=sodA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34 Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 1 Query: 55 LHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 552 LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG DT +L++ + T P ++PLL +D+WEHA+YLQYKNVK D+ K WNV+NW Sbjct: 1 LHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDEAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIIPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNW 161
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34 Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 L YDY LEP I + +HH KHH YV N N A+E + NK + L+ A++ NGGGH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 9 LSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDRVNEKY 199
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 77/198 (38.89%), Postives = 111/198 (56.06%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQG-------AIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 L YDY LEP I + +HH KHH YV N N +E + NK + L A++ NGGGH HS+FW+ ++P GGGEP + + ID +F + + L ++S + GSG+ WL LD E L V +T NQD + + +PLL IDVWEHAYYL+Y+N +P+++ N W+ +NW ++ Y Sbjct: 9 LSYDYDELEPHIDSNTLSIHHGKHHATYVNNLNATLENYTELHNKSLEELLCNLDTLPKEIVTAVRNNGGGHYCHSLFWEVMSP--RGGGEP-NGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDGE--ELSVMSTPNQDTPLQEGK--IPLLVIDVWEHAYYLKYQNRRPEFVTNWWHTVNWDQVNEKY 199
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_METTM (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=sod PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33 Identity = 72/185 (38.92%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWK 555 LPY Y ALEP IS E +++HH+KHHQAYV N + +L A + + + F+ GG+V H FW N+ P E GGE P L I+ FGS + ++ S + +GSGW L RL + + V P L+ +DVWEHAYY+ Y+NV+PDY++ WN++NWK Sbjct: 11 LPYPYDALEPYISEEQLRIHHEKHHQAYVDGANGVLRKLDDARENGEEVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGE-PDGRLAEYIEKDFGSFQRFKKEFSQAAVSAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILMVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWK 192
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33 Identity = 79/192 (41.15%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPY AL P IS E ++ HH KH + YV N NK + + D +T+VQ +G I N G +NH++++ P G G P LG AID FGS E ++ + G L GSGWVWL D K L +E N V K L PLLG DVWEHAYYL Y+N + D+LK++W++++W Y Sbjct: 8 LPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLI--IGTEFENADLNTIVQKSEGGIFNNAGQTLNHNLYFTQFRP---GKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGK-LSIEKEPNAGNPVRKG--LNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESRY 191
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_BACSU (Probable superoxide dismutase [Fe] OS=Bacillus subtilis GN=sodF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33 Identity = 78/199 (39.20%), Postives = 110/199 (55.28%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP*AW 597 LPY YSALEP IS +IM LHH KHHQ+YV NKA +L +A + + + + F+G GH HSIFW ++ H G P +L ID FGS A + + ++G GW L RL + TA + L ++ ++PLL +DVWEHAYYLQYKN + Y+ + WNV++W+ A +++ W Sbjct: 85 LPYKYSALEPYISRDIMILHHTKHHQSYVDGLNKAESELKKARATKNYDLITHWERELAFHGAGHYLHSIFWFSM---HPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQASKKVEGVGWAILVWAPRSGRLEI-LTAEKHQLFSQW-DVIPLLPLDVWEHAYYLQYKNDRASYVDHWWNVVDWREAEKRFEQAKEVVW 278 The following BLAST results are available for this feature:
BLAST of DR908105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908105 ID=DR908105; Name=DR908105; organism=Citrus sinensis; type=EST; length=722bpback to top |