DR908105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29 Identity = 70/189 (37.04%), Postives = 99/189 (52.38%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 564 LPY AL P IS E ++ H+ KHHQ YVTN N ++ A +++ FN V NH+ +W LAP GGEP + AI FGS + + GSGW WL +++ K +V T+ PL T A PLL +DVWEHAYY+ Y+N +P YL++ W ++NW++ + Sbjct: 8 LPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGT--AFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAP--NAGGEPT-GKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDA---TPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVA 188
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTK---APTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 564 LPY Y++LEP + M +HH +HHQAY+ N N +E+L LN + + LQ N GGH+NHS+FWK L ++ +F S++ ++ + GSGW+WL + L + TT NQ+ PL+ K + +P+LG+D+WEHAYYL+YKN + DY+ WNV+NW S Sbjct: 8 LPYSYNSLEPFFDEKTMIIHHTRHHQAYINNTNSILNGTHYENLLIEELISKLNILSIENKLALQN----NAGGHINHSLFWKWLKL-----NTILKDDFKIILEKNFKSVDFFKKQFEKIALSHFGSGWIWL-IKKYDNTLRIVTTVNQNTPLMGKEISGISGIPILGLDLWEHAYYLKYKNNRSDYVNAFWNVVNWDEVS 199
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 L YDY A+EP I + M++HH KHH +V N N +E++ + ++ D S ++ + Q I+ N GG+ NH+++++ L P G + I+ FGSL+ L + + GSGW WL L E V+ PL+ + P+LGIDVWEHAYYL+Y+N + +Y+ +NW+ S VY + Sbjct: 7 LGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQNRRIEYVDAFLKALNWEEVSKVYNE 200
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 69/188 (36.70%), Postives = 98/188 (52.13%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 564 LPY+ +ALEP IS E ++ HH KHH YV N N + + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T +PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + + Sbjct: 8 LPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGT-EFEGKSLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGNPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWDFVA 188
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 69/192 (35.94%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 576 LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W L+P GGG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 8 LPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKSSSGGIFNNAAQVWNHTFYWNCLSP--NGGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28 Identity = 70/193 (36.27%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 LPY +ALEP IS + + H+ KH Q YV N N V V+ GAI N G +NH++++ AP + P LG AI FGS E ++ +A L GSGW WL +D + K + + +P+ L PLLG DVWEHAYYL Y+N + D++ +W +++W DV +K Sbjct: 8 LPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEYEGKTVEAIVASAPDGAIFNNAGQVLNHTLYFLQFAP--KPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSVDKDGKLHITKEPNGSNPV---RAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWEIIDW----DVVEK 191
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 69/192 (35.94%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 576 LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W LAP GG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY+ Y+N++P Y++ WN++NW + ++ ++ Sbjct: 8 LPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLAP--NAGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFE 192
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 72/195 (36.92%), Postives = 99/195 (50.77%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV----QLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLK-NIWNVMNWKYASD 567 LPYD + +P + E HH KHH AYV N N ++ + L K D ++ Q A FN + NHS FW ++ P +GGG+P L I+ FGS E ++ E GSGW WL RL + TAN + + PLL DVWEHAYY+ Y+N +PDY+ I +++NWK+ D Sbjct: 19 LPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDK-EELQKKDLEEIIEWSSQNSNAAIFNNAAQIWNHSFFWHSIKP--QGGGKPSGKILE-QINKDFGSFEGFCEQFKQEAVGQFGSGWAWLVYHDN--RLQIIKTANAGTPIANG--MKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVED 205
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_HALMA (Superoxide dismutase [Mn] OS=Haloarcula marismortui GN=sod PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 70/193 (36.27%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 LPYDY ALEP IS +++ HH HHQ YV A E L + + D + G + NG GH H++FW+N+ P GGGEP L I+ FGS E K E AA GW L D K+L D P+L +DVWEH+YY Y + D++ + V++W A++ Y+K Sbjct: 12 LPYDYDALEPHISEQVLTWHHDTHHQGYVNGLESAEETLAENRDAGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEG--WKGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDYGPARGDFIDAFFEVVDWDKAAEEYEK 197
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 1 LPYDYSALEP-AISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKN-IWNVMNWKYASDVYQK 579 LPYD++ALE + GE + H+ KHH+AYV N NK + A ++ + + A K FN V NH+ FW +L P GG P I+ FGS + L ++ S A GSGW WL +D V +T ++PL A LL +DVWEHAYY+ ++N +P ++KN + N++NW +A+ Y K Sbjct: 8 LPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELADKSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPA---GGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWL-IDDGGTLKVTKTPNAENPL---AHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWDFAAANYAK 199 The following BLAST results are available for this feature:
BLAST of DR908105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908105 ID=DR908105; Name=DR908105; organism=Citrus sinensis; type=EST; length=722bpback to top |