DR908105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38 Identity = 83/201 (41.29%), Postives = 120/201 (59.70%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPY + ALEP I E M++HH KHH YVT N K++E++ L+ V + +Q A++ NGGGH+NHS+FW+ L P E GE I +GSL+ ++ + + AA GSGW WL ++ +L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 8 LPYAFDALEPHIDKETMEIHHDKHHNTYVTKLNAVVEGTDLEAKSIEEIVANLDSVPSD----IQTAVRNNGGGHLNHSLFWELLTPNSEEKGEVVEK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38 Identity = 82/199 (41.21%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE-------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 576 LPY++ ALEP I E M++HH KHH YVT N A+E + + + +D S +Q A++ NGGGH+NHS+FW+ L P E G I +GSL+ + + + A GSGW WL +D + K L + +T NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW ++Y+ Sbjct: 8 LPYEFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIEGTDLENKSIEEIVANLD-SVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKGTVIDK-----IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYIDAFWNVVNWNKVDELYE 197
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38 Identity = 83/205 (40.49%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 582 L Y Y+ALEP + M++HH KHHQAYV N N A+E L L ++ ++ + +GA++ N GGH NHS+FWK+L G +L AI+ FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 8 LGYAYNALEPHFDAQTMEIHHSKHHQAYVNNANAALEGLPAELVEMYPGHLISNLDKIPAEKRGALRNNAGGHTNHSLFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38 Identity = 85/147 (57.82%), Postives = 98/147 (66.67%), Query Frame = 1 Query: 34 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 474 IS EIMQ+HHQKHH YV N N A EQL +A++K D + ++ LQ AIKFNGGGH+NHSIFW NL P GGGEP L AI FGS EA +KM+A A+QGSGW WLGLD K+L + NQDPL L PLLGIDV Sbjct: 2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38 Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 564 LPY Y ALEP E M++H+ KHH YVT N+AV + +K V L +GA++ +GGGH NH++FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y++ WNV+NW A+ Sbjct: 8 LPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEAN 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 82/197 (41.62%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPY + ALEP I + M++HH KHH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L P E G I +GSL+A ++ + + AA GSGW WL ++ L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 8 LPYGFDALEPHIDQQTMEIHHGKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK-----IKEQWGSLDAFKEEFADKAAARFGSGWAWLVVNNG--NLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 82/197 (41.62%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT------STVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 573 LPY + ALEP I + M++HH KHH YVT N AVE ++ S +Q A++ NGGGH+NHS+FW+ L P E G I +GSL+A ++ + + AA GSGW WL ++ L + TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 8 LPYGFDALEPHIDKQTMEIHHDKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK-----IKEQWGSLDAFKEEFADKAAARFGSGWAWLVVNNG--NLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38 Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 564 LPY Y ALEP E M+LH+ KHH YVT N+AV + K V L +GA++ +GGGH NH++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW A+ Sbjct: 8 LPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAVSGHPELAEKPVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVVNWDEAN 195
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38 Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 LPY +ALEP M+LHH KHHQ YV N N A+E+ + +L ++ D S + + ++ A++ NGGGH+NHS FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 8 LPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204
BLAST of DR908105 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38 Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1 Query: 1 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 579 LPY +ALEP M+LHH KHHQ YV N N A+E+ + +L ++ D S + + ++ A++ NGGGH+NHS FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 8 LPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204 The following BLAST results are available for this feature:
BLAST of DR908105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908105 ID=DR908105; Name=DR908105; organism=Citrus sinensis; type=EST; length=722bpback to top |