DR908087

Overview
NameDR908087
Unique NameDR908087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:1884..2617. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 345.51 bits (885), Expect = 1.720e-94
Identity = 166/230 (72.17%), Postives = 192/230 (83.48%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD-RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 687
            ARLDRVKNLTGLVE Y KN+KLREL NLV+VGG     +S+D EE AE++KM+SLI+QY L+G+FRWI++QMNR RNGELYRYI DTKG FVQPA YEAFGLTVVE+MTC LPTFATC GGPAEII NG SG+HIDPYH +Q A  LV FFE C  +P++W KIS GGLKRI E+YTWK YS+RLLTL GVY FWKHVS L+R E+RRYLEMFY+LK+R LA S+PLA +
Sbjct:  574 ARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.484e-93
Identity = 165/228 (72.37%), Postives = 195/228 (85.53%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 681
            ARLDRVKN+TGLVE Y KN+KLRELVNLVVV G    K+S D EE  E++KM+ L+ QY LNG+FRWI++Q NR RNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEII +G SG+HIDPYH +QA+E+LVDFF++CK DP++W+K+S GGL+RI E+YTWKIYS+RL+TL GVY FWK+VS L+R E+RRYLEMFY LK+R LA SVP+A
Sbjct:  580 ARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.233e-92
Identity = 166/230 (72.17%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG-DRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 687
            ARLDRVKN+TGLVE YGKNAKLREL NLVVV G +  K+S D EE AE++KM+ LI +Y L GQFRWI+SQ NRVRNGELYRYICD  G F QPA YEAFGLTVVEAMTCGLPTFATC GGPAEII +G SG+HIDPYH +Q AE + +FF KC+ DP+YW KIS GGL RI+E+YTW+ YS+RL+TL GVYGFWK+VS L+R E+RRYLEMFY LK+R LA SVPLA +
Sbjct:  523 ARLDRVKNITGLVECYGKNAKLRELANLVVVAGYNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGELYRYICDKGGIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATD 751          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.955e-70
Identity = 139/220 (63.18%), Postives = 162/220 (73.64%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD---LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKY 651
            ARLDRVKN+TG VE  GK A+LREL N V+V GD  KESKD    EEQ   KKMYSLID YK  G  R IS+QMNRVRNGELY+YICDTKGAFVQPA YEAF L                   P EII +G SG HIDPYH ++ A+ILV+FF+KC ADPSYWD+IS GG +RI EKYTWK+YS+RL+TLTG YGFW +VS L+R ++ RY++MFYAL+Y
Sbjct:    1 ARLDRVKNMTGPVEISGKKARLRELANPVIVAGDHGKESKDRDEAEEQGGFKKMYSLIDDYKFKGHIRLISAQMNRVRNGELYQYICDTKGAFVQPA-YEAFRLDCDRVHEVRSAKDRDLPWRPCEIIADGVSGLHIDPYHSDKDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 68/187 (36.36%), Postives = 95/187 (50.80%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            AR D  KN+T LV+ +G+   LREL NL ++ G+R   +       + +  +  LIDQY L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  AD   W K    GLK I   Y+W  +S+  L+
Sbjct:  480 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDQYDLYGQVAY-PKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALL----KLVADKQLWTKCQQNGLKNI-HLYSWPEHSKTYLS 660          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 67/187 (35.83%), Postives = 96/187 (51.34%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            AR D  KNLT LV+ +G+   LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +II    +G  IDP+  +  A+ L+    K  AD   W K    GLK I   ++W  + +  L+
Sbjct:  490 ARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLISILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALL----KLVADKHLWTKCRQNGLKNI-HLFSWPEHCKNYLS 670          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20
Identity = 64/187 (34.22%), Postives = 95/187 (50.80%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            +R D  KN+T LV+ +G+   LREL NL ++ G+R   +       + +  +  LID+Y L G   +     N+    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I   Y+W  + +  LT
Sbjct:  495 SRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALL----KLVADKNLWQECRRNGLRNI-HLYSWPEHCRTYLT 675          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 68/189 (35.98%), Postives = 95/189 (50.26%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 552
            AR D  KNLT LV+ +G+   LR+L NL ++ G+R   +       A +  +  +ID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP H +QA   + D   K  AD   W K    GLK I   ++W    K Y  R+
Sbjct:  480 ARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDP-HDQQA---IADALLKLVADKQLWAKCRANGLKNI-HLFSWPEHCKTYLSRI 662          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            +R D  KN+T LV+ +G+   LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  509 SRPDPKKNITTLVKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            +R D  KN+T LV+ +G+   LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  509 SRPDPKKNITTLVKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
The following BLAST results are available for this feature:
BLAST of DR908087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_ARATH1.720e-9472.17Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_PEA2.484e-9372.37Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU1.233e-9272.17Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUSY_SACOF2.955e-7063.18Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS_BETVU1.942e-2136.36Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SPIOL1.259e-2035.83Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_MAIZE6.247e-2034.22Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_SOLTU1.066e-1935.98Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS_ORYSJ3.100e-1934.03Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI3.100e-1934.03Probable sucrose-phosphate synthase OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16215 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908087 ID=DR908087; Name=DR908087; organism=Citrus sinensis; type=EST; length=730bp
GCAAGATTGGACCGTGTAAAGAATTTGACTGGGCTTGTGGAGTGGTATGG
AAAGAATGCTAAGCTACGTGAGTTGGTGAACTTAGTCGTAGTGGGTGGTG
ATAGGAGAAAGGAGTCCAAGGACTTGGAAGAACAGGCTGAAATGAAGAAG
ATGTATTCCCTCATTGATCAATACAAATTGAATGGCCAGTTCCGATGGAT
CTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATTGTACCGGTACATTT
GTGATACAAAGGGAGCTTTTGTGCAACCTGCACTGTATGAGGCCTTTGGC
TTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCAACATTTGCAACTTG
CAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAAATCTGGCTACCACA
TTGATCCTTACCATGGTGAGCAGGCTGCTGAGATCCTTGTTGACTTCTTT
GAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAGATATCACTGGGTGG
CCTGAAGCGTATTGAAGAGAAGTATACATGGAAAATTTACTCTCAGAGGC
TTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAACATGTATCTAACCTT
GATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTTTATGCTCTCAAGTA
CCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGTGGAGTAAATGGACATTG
AGGAAGCTCTCAGGGTGGTTGGTCCGAGTG
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