DR908087

Overview
NameDR908087
Unique NameDR908087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:1884..2617. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 66/200 (33.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRLLTLTGVYGFWK 585
            AR D  KN+T LV+ +G+   LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  IDP+  +  A+ L+    K  ++   W K    GLK I   ++W    K Y  ++ T    +  W+
Sbjct:  483 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALL----KLVSNKQLWAKCRQNGLKNI-HLFSWPEHCKTYLSKIATCKPRHPQWQ 676          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            +R D  KN+T LV+ +G+   LREL NL ++ G+R     D++E +      +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  ++ + W++    GLK I   ++W  + +  LT
Sbjct:  503 SRPDPKKNITTLVKAFGECRPLRELANLTLIMGNR----DDIDEMSGGNASVLTTVLKLIDRYDLYGQVAF-PKHHKQSDVPEIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNI-HLFSWPEHCRTYLT 683          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 64/187 (34.22%), Postives = 95/187 (50.80%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 558
            AR D  KNLT LV+ +G+   LREL NL ++ G+R    +     A  +  +  +ID+Y L G   +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP++ E  A+ L+    K  A+   W K    GLK I   ++W  + +  L+
Sbjct:  481 ARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKYDLYGLVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALL----KLVAEKHLWAKCRANGLKNI-HLFSWPEHCKSYLS 661          
BLAST of DR908087 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 66/189 (34.92%), Postives = 94/189 (49.74%), Query Frame = 1
Query:    1 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 552
            AR D  KN+T LV+ +G+   LREL NL ++ G+R    +     A  +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A+ L+    K  A    W +    GLK I   ++W    K Y  R+
Sbjct:  482 ARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL----KLVAGKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664          
The following BLAST results are available for this feature:
BLAST of DR908087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SPS_VICFA6.907e-1933.00Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS2_CRAPL9.021e-1933.51Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS1_CRAPL1.539e-1834.22Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS1_CITUN2.010e-1834.92Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16215 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908087 ID=DR908087; Name=DR908087; organism=Citrus sinensis; type=EST; length=730bp
GCAAGATTGGACCGTGTAAAGAATTTGACTGGGCTTGTGGAGTGGTATGG
AAAGAATGCTAAGCTACGTGAGTTGGTGAACTTAGTCGTAGTGGGTGGTG
ATAGGAGAAAGGAGTCCAAGGACTTGGAAGAACAGGCTGAAATGAAGAAG
ATGTATTCCCTCATTGATCAATACAAATTGAATGGCCAGTTCCGATGGAT
CTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATTGTACCGGTACATTT
GTGATACAAAGGGAGCTTTTGTGCAACCTGCACTGTATGAGGCCTTTGGC
TTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCAACATTTGCAACTTG
CAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAAATCTGGCTACCACA
TTGATCCTTACCATGGTGAGCAGGCTGCTGAGATCCTTGTTGACTTCTTT
GAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAGATATCACTGGGTGG
CCTGAAGCGTATTGAAGAGAAGTATACATGGAAAATTTACTCTCAGAGGC
TTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAACATGTATCTAACCTT
GATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTTTATGCTCTCAAGTA
CCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGTGGAGTAAATGGACATTG
AGGAAGCTCTCAGGGTGGTTGGTCCGAGTG
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