DR908073

Overview
NameDR908073
Unique NameDR908073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2998 contig Csv1_Contig2998:298..1040. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_YEAST (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae GN=NSA2 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.257e-84
Identity = 160/243 (65.84%), Postives = 185/243 (76.13%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            DYIE H K++G RLDH ERKRK+EARE HK SE AQK  G KGK FAKKRYAEK  M+K +  HE+S  +        +G A+P YLLDRE    AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKVI++GK R+K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+ VKKNP  PMYT LGV+TKGTIIEVNVSELG+VT  GKVVWGKYAQVTN
Sbjct:    5 DYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSRSKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWGKYAQVTN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_YEAS7 (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=NSA2 PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.257e-84
Identity = 160/243 (65.84%), Postives = 185/243 (76.13%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            DYIE H K++G RLDH ERKRK+EARE HK SE AQK  G KGK FAKKRYAEK  M+K +  HE+S  +        +G A+P YLLDRE    AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKVI++GK R+K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+ VKKNP  PMYT LGV+TKGTIIEVNVSELG+VT  GKVVWGKYAQVTN
Sbjct:    5 DYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSRSKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTAGGKVVWGKYAQVTN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_VANPO (Ribosome biogenesis protein NSA2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NSA2 PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.078e-83
Identity = 157/243 (64.61%), Postives = 186/243 (76.54%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRK+EARE HK SE AQK  G KGK FAKKRY+EK  M+K +  HE+S  +       + G A+P YLLDRE T  AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKV+++GK +TK WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+ VKKNP  PMYT LGV+TKGTIIEVNVSELG+VT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKQHGRRLDHEERKRKREAREAHKISERAQKLTGWKGKQFAKKRYSEKVAMRKKIKAHEQSKVKGGSKPLDESGDALPTYLLDREQTNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVVKTGKSKTKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILSVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTSGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_YARLI (Ribosome biogenesis protein NSA2 OS=Yarrowia lipolytica GN=NSA2 PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.409e-83
Identity = 157/244 (64.34%), Postives = 186/244 (76.23%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEES--SSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRK+EARE H+ S+ AQ   G + KMFAKKRYAEK  MKK +  HE+S  +   K  +     A+P YLLDR+    AK LS++IKQKR EKA K+ VPLPKVR ++E+EMFKV++SGKRR K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T +L I+GVKKNP  PMYT LGV+T+GTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEAHIKKHGRRLDHDERKRKREAREGHRISKDAQNLTGFRAKMFAKKRYAEKVAMKKKIREHEQSKVNGTPKEHNPEDGDALPTYLLDRQQPNSAKALSSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVLKSGKRRNKSWKRMITKHTFVGEGFTRRPVKLERIIRPSALRQKKANVTHPELGVTVHLPILGVKKNPQSPMYTQLGVLTRGTIIEVNVSELGLVTAGGKVVWGKYAQITN 248          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_KLULA (Ribosome biogenesis protein NSA2 OS=Kluyveromyces lactis GN=NSA2 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.840e-83
Identity = 160/244 (65.57%), Postives = 187/244 (76.64%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSR--RKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRK+EARE HK SE AQK  G KGK FAKKRYAEK  MKK +  HE+S  +   K  DE  E A+P YLLDRE    AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKV+++GK ++K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+ VKKNP  PMYT LGV+TKGTIIEVNVSELG+VT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKQHGRRLDHDERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMKKKIRAHEQSKVKGGSKPLDENGE-ALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVVKTGKSKSKAWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTSGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_LODEL (Ribosome biogenesis protein NSA2 OS=Lodderomyces elongisporus GN=NSA2 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.318e-81
Identity = 154/243 (63.37%), Postives = 185/243 (76.13%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRKKEARE H+ ++ AQ   G + K FAKKRY+EK  M+K +  H+ES  +     +  EG A+P YLLDR+    AK LS++IKQKR EKA K+ VPLPKVR ++E+EMFKVI++GK +TK WKRM+TK TFVG GFTR+P K ER IRP+ LR  KA+VTHPEL  T  L I+GVKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKQHGRRLDHEERKRKKEAREGHRVAKDAQTLKGWRAKQFAKKRYSEKVSMRKKIKAHQESKVKGPSTPKQDEGEALPTYLLDRQTNNTAKALSSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSKTKSWKRMITKHTFVGEGFTRRPVKMERIIRPAALRQKKANVTHPELGVTVFLPILGVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_PICGU (Ribosome biogenesis protein NSA2 OS=Pichia guilliermondii GN=NSA2 PE=3 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.249e-81
Identity = 152/243 (62.55%), Postives = 187/243 (76.95%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRK+ ARE H+ ++ AQ   G +GK FAK+RY+EK  MKK +  H+ES  +     +  +G A+P YLLDR++T  AK +S++IKQKR EKA K+ VPLPKV+ ++E+EMFKVI++GK +TK WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+GVKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEKHIKQHGRRLDHEERKRKRAAREGHRVAKDAQTLKGWRGKQFAKQRYSEKVAMKKKIKAHQESKVKGPSTPKENDGEALPTYLLDRKDTNTAKAISSSIKQKRMEKADKFSVPLPKVKGISEEEMFKVIKTGKSKTKSWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILGVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_CANAL (Ribosome biogenesis protein NSA2 OS=Candida albicans GN=NSA2 PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.836e-81
Identity = 151/243 (62.14%), Postives = 187/243 (76.95%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLD+ ERKRKKEARE H+ ++ AQ   G + K FAKKRYAEK  MKK +  H+ES  +     + ++G A+P YLLDR+    AK +S++IKQKR EKA K++VPLPKV+ ++E+EMFKVI++GK ++K WKRM+TK TFVG GFTR+P K ER IRP+ LR  KA+VTHPEL  T  L I+GVKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKKHGRRLDYEERKRKKEAREGHRVAKDAQTLKGWRAKQFAKKRYAEKVAMKKKIKAHQESKVKGPSTPKAEDGEALPTYLLDRQTNNTAKAISSSIKQKRLEKADKFQVPLPKVKGISEEEMFKVIKTGKSKSKSWKRMITKHTFVGEGFTRRPVKMERIIRPAALRQKKANVTHPELGVTVFLPILGVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_PICST (Ribosome biogenesis protein NSA2 OS=Pichia stipitis GN=NSA2 PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.116e-80
Identity = 152/243 (62.55%), Postives = 183/243 (75.31%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLDH ERKRKKEARE H+ ++ AQ   G + K FAKKRY+EK  MKK +  H+ES        +  +G A+P YLLDR+    AK +S++IKQKR EKA K+ VPLPKVR ++E+EMFKVI++GK + K WKRM+TK TFVG GFTR+P K ER IRP+ LR  KA+VTHPEL  T  L I+GVKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKQHGRRLDHEERKRKKEAREGHRIAKDAQTLKGWRAKQFAKKRYSEKVAMKKKIKAHQESKVNGPATPKEDDGEALPTYLLDRQTNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVIKTGKSKHKSWKRMITKHTFVGEGFTRRPVKMERIIRPAALRQKKANVTHPELGVTVFLPILGVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_DEBHA (Ribosome biogenesis protein NSA2 OS=Debaryomyces hansenii GN=NSA2 PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.458e-80
Identity = 150/243 (61.73%), Postives = 187/243 (76.95%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE H K++G RLD+ ERKRKK ARE H+ ++ AQ+  G +GK FAKKRY+EK  MKK +  H+ES  +     +  +G A+P YLLDR+    AK +S++IKQKR EKA K+ VPLP+V+ ++E+EMFKVI++GK+++K WKRM+TK TFVG GFTR+P K ER IRPS LR  KA+VTHPEL  T  L I+GVKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGKYAQ+TN
Sbjct:    5 EYIEQHIKQHGRRLDYEERKRKKAAREGHRIAKDAQELKGWRGKQFAKKRYSEKVAMKKKIKTHQESKVKGPATPKEDDGEALPTYLLDRQTNNSAKAISSSIKQKRLEKADKFAVPLPRVKGISEEEMFKVIKTGKQKSKAWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELAVTVFLPILGVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKYAQITN 247          
The following BLAST results are available for this feature:
BLAST of DR908073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
NSA2_YEAST8.257e-8465.84Ribosome biogenesis protein NSA2 OS=Saccharomyces ... [more]
NSA2_YEAS78.257e-8465.84Ribosome biogenesis protein NSA2 OS=Saccharomyces ... [more]
NSA2_VANPO1.078e-8364.61Ribosome biogenesis protein NSA2 OS=Vanderwaltozym... [more]
NSA2_YARLI1.409e-8364.34Ribosome biogenesis protein NSA2 OS=Yarrowia lipol... [more]
NSA2_KLULA1.840e-8365.57Ribosome biogenesis protein NSA2 OS=Kluyveromyces ... [more]
NSA2_LODEL1.318e-8163.37Ribosome biogenesis protein NSA2 OS=Lodderomyces e... [more]
NSA2_PICGU2.249e-8162.55Ribosome biogenesis protein NSA2 OS=Pichia guillie... [more]
NSA2_CANAL3.836e-8162.14Ribosome biogenesis protein NSA2 OS=Candida albica... [more]
NSA2_PICST1.116e-8062.55Ribosome biogenesis protein NSA2 OS=Pichia stipiti... [more]
NSA2_DEBHA1.458e-8061.73Ribosome biogenesis protein NSA2 OS=Debaryomyces h... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16201 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-36_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908073 ID=DR908073; Name=DR908073; organism=Citrus sinensis; type=EST; length=743bp
AATTCGGCACGAGGATTACATAGAGCTTCACAGGAAGCGAAATGGCTACC
GTCTCGATCACTTCGAGCGCAAGCGCAAGAAGGAGGCGCGTGAAGTCCAT
AAGCGCTCCGAAATTGCCCAAAAGGCTTTGGGTATTAAGGGCAAGATGTT
TGCTAAAAAACGCTATGCTGAGAAGGCTCTCATGAAGAAAACTTTGGCTA
TGCATGAAGAGTCATCAAGTCGTAGAAAGGTGGATGATGAAGTTCAAGAG
GGTGCTGTTCCTGCTTATTTGCTTGATCGTGAAAACACAACAAGAGCAAA
GGTGCTTAGCAACACTATAAAGCAAAAAAGAAAAGAGAAAGCTGGAAAGT
GGGAGGTACCCCTTCCCAAGGTTAGGCCAGTAGCGGAAGATGAAATGTTT
AAAGTCATCAGATCTGGTAAACGAAGAACCAAGCAATGGAAGAGGATGGT
CACAAAGGCCACATTTGTTGGACCTGGTTTTACAAGAAAACCTCCCAAGT
ATGAGAGGTTCATTCGTCCTTCGGGTTTGCGTTTTACCAAAGCTCATGTA
ACTCACCCTGAACTTAAGTGCACCTTCAATCTTGAGATCATTGGAGTGAA
AAAGAATCCTAATGGTCCGATGTATACCTCTCTTGGTGTTATTACTAAGG
GGACGATCATTGAGGTGAATGTCAGTGAATTGGGTCTGGTAACACCAGCT
GGAAAAGTTGTGTGGGGAAAATATGCACAAGTGACAAATAATC
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