DR908073

Overview
NameDR908073
Unique NameDR908073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2998 contig Csv1_Contig2998:298..1040. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_PHANO (Ribosome biogenesis protein NSA2 OS=Phaeosphaeria nodorum GN=NSA2 PE=3 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.486e-80
Identity = 148/244 (60.66%), Postives = 183/244 (75.00%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQ-WKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNN 742
            +YIE  +K++G R DH ERKRK+ ARE H  S+ AQ   G++ K++A+KR  EK  MKKT+  HEE + +     E    A+P YLLDR N   AK LS+ IKQKR EKA ++ VPLPKV+ ++E+EMF V+++GK+  K+ WKRM+TK TFVGPGFTR+P KYERFIRP GLR+ KA+VTHPEL  T  L II VKKNP  P+YT LGV+TKGTIIEVNVSELGLVT  GKVVWG+YAQ+TNN
Sbjct:    5 EYIERWQKQHGKRFDHDERKRKRIAREGHDGSKKAQNYRGLRAKLYAEKRRKEKIQMKKTIRAHEERNVKTSEPAEPSTEALPQYLLDRSNEKNAKALSSAIKQKRNEKAARFSVPLPKVKGISEEEMFSVVKTGKKTAKKSWKRMITKPTFVGPGFTRRPVKYERFIRPMGLRYKKANVTHPELSVTVQLPIISVKKNPQNPLYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGRYAQITNN 248          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_ASPFU (Ribosome biogenesis protein nsa2 OS=Aspergillus fumigatus GN=nsa2 PE=3 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.234e-80
Identity = 146/247 (59.11%), Postives = 184/247 (74.49%), Query Frame = 2
Query:    2 IRHEDYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKR-RTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +R   YIE  +K++G RLDH ER RK++ARE HK+S+ AQ   G++ K++ +KR+AEK  M+K +   EE + +    DE  +  +P YLLDR   T AK LS+ IK KR EKA K+ VPLPKV+ ++E+EMFKV+ +GK+   K WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHPEL  T  L I+GVKKNP  P+YT LGV+TKGTIIEVNVSELGLVT +GKVVWGKYAQ+TN
Sbjct:   23 LRTSSYIERWQKQHGKRLDHDERVRKRQARESHKQSQDAQNLRGLRAKLYQQKRHAEKIQMRKRIKAQEEKNVKSSAPDEPSKTPLPQYLLDRSQATNAKALSSAIKDKRAEKAAKFAVPLPKVKGISEEEMFKVVNTGKKTHKKSWKRMITKPTFVGSDFTRRPVKYERFIRPMGLRYKKANVTHPELGVTVQLPILGVKKNPQNPLYTQLGVLTKGTIIEVNVSELGLVTTSGKVVWGKYAQITN 269          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_NEOFI (Ribosome biogenesis protein nsa2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nsa2 PE=3 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.612e-79
Identity = 145/243 (59.67%), Postives = 183/243 (75.31%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKR-RTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE  +K++G RLDH ER RK++ARE HK+S+ AQ   G++ K++ +KR+AEK  M+K +   EE + +    DE  +  +P YLLDR   T AK LS+ IK KR EKA K+ VPLPKV+ ++E+EMFKV+ +GK+   K WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHPEL  T  L I+GVKKNP  P+YT LGV+TKGTIIEVNVSELGLVT +GKVVWGKYAQ+TN
Sbjct:   15 EYIERWQKQHGKRLDHDERVRKRQARESHKQSQDAQNLRGLRAKLYQQKRHAEKIQMRKRIKAQEEKNVKSSAPDEPSKTPLPQYLLDRSQATNAKALSSAIKDKRAEKAAKFAVPLPKVKGISEEEMFKVVNTGKKTHKKSWKRMITKPTFVGSDFTRRPVKYERFIRPMGLRYKKANVTHPELGVTVQLPILGVKKNPQNPLYTQLGVLTKGTIIEVNVSELGLVTTSGKVVWGKYAQITN 257          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_BOTFB (Ribosome biogenesis protein nsa2 OS=Botryotinia fuckeliana (strain B05.10) GN=nsa2 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.105e-79
Identity = 147/242 (60.74%), Postives = 180/242 (74.38%), Query Frame = 2
Query:   20 IELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQ-WKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNN 742
            +E  RK +G RLDH ER RKK ARE HK S+ AQK  G++ K++ +KR  EK  MKK +  HEE + +    +E     +P YLLDR N T AK LS+ IK KR EKA K+ VPLPKVR +AE+EMFKV+++GK+  K+ WKRM+TK TFVGP FTR+P KYERFIRP GLR+ KA+VTHPEL  T  L II VKKNP  PMYT LGV+T+GTI+EVNVS+LGLVT  GKVVWG++AQ+TNN
Sbjct:    1 MERWRKLHGRRLDHEERSRKKAAREGHKASDDAQKLTGLRAKLYQQKRRHEKIQMKKQIKAHEERNVKSSAPNEPSTKPLPQYLLDRSNPTNAKALSSAIKNKRAEKAAKFSVPLPKVRGIAEEEMFKVVKTGKKTAKKSWKRMITKPTFVGPDFTRRPVKYERFIRPMGLRYKKANVTHPELGVTVQLPIISVKKNPQNPMYTQLGVLTRGTIVEVNVSDLGLVTAGGKVVWGRWAQITNN 242          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_NEUCR (Ribosome biogenesis protein nsa-2 OS=Neurospora crassa GN=nsa-2 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.039e-78
Identity = 141/244 (57.79%), Postives = 186/244 (76.23%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKR-RTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNN 742
            +YIE  +K +G RLD  ER RKK ARE HK+SE AQ   G++ K+FAK+R+A+K  M+K +  HEE + +   +++     VPAYLLDR N T AK LS+ IK KR EKA ++ VP+PKV+ ++E+E+FKV+++GK+   K WKR+VTK TFVGP FTR+P KYERFIRP GLR+ KA+VTHP L  T  L I+GVKKNP+ P+YT LGV++KGTIIEVNVS+LG+VT +GK+ WG+YAQ+TNN
Sbjct:    5 EYIERAQKLHGKRLDTEERARKKAAREGHKQSENAQNLRGLRAKLFAKERHAQKIQMRKAIKQHEERNVKGAPEEKDPSNPVPAYLLDRSNPTSAKALSSQIKSKRAEKAARFSVPIPKVKGISEEELFKVVKTGKKVHKKGWKRVVTKPTFVGPDFTRRPVKYERFIRPMGLRYKKANVTHPTLNVTVQLPILGVKKNPSNPLYTQLGVLSKGTIIEVNVSDLGMVTASGKIAWGRYAQITNN 248          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_ASPCL (Ribosome biogenesis protein nsa2 OS=Aspergillus clavatus GN=nsa2 PE=3 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.969e-78
Identity = 143/242 (59.09%), Postives = 181/242 (74.79%), Query Frame = 2
Query:   17 YIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKR-RTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            YIE  +K++G RLDH ER RK++ARE HK+S+ AQ   G++ K++ +KR+ EK  M+K +   EE + +    DE  +  +P YLLDR   T AK LS+ IK KR EKA K+ VPLPKV+ ++E+EMFKV+ +GK+   K WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHPEL  T  L I+GVKKNP  P+YT LGV+TKGTIIEVNVSELG+VT +GKVVWGKYAQ+TN
Sbjct:   10 YIERWQKQHGKRLDHDERVRKRQAREGHKQSQDAQNLRGLRAKLYQQKRHKEKIQMRKRIKAQEEKNVKSSAPDEPSKTPLPQYLLDRSQATNAKALSSAIKDKRAEKAAKFAVPLPKVKGISEEEMFKVVDTGKKTHKKSWKRMITKPTFVGSDFTRRPVKYERFIRPMGLRYKKANVTHPELGVTVQLPILGVKKNPQNPLYTQLGVLTKGTIIEVNVSELGIVTTSGKVVWGKYAQITN 251          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_AJECN (Ribosome biogenesis protein NSA2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=NSA2 PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.777e-77
Identity = 143/244 (58.61%), Postives = 180/244 (73.77%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQ-WKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNN 742
            +YIE  +K+ G RLDH ER RK+ ARE HK+S  AQ   G++ K++ KKR+AEK  MKK +   EE + +    +E     +P YLLDR   T AK LS+ IK KR EKA ++ VPLPKV+ ++E+EMFKV+++GK+  K+ WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHP+L  T  L II VKKNP  PMYT LGV+TKGTIIEVNVSELG VT +GKV+WGK+AQ+TNN
Sbjct:    5 EYIERWQKQYGERLDHEERTRKRIAREAHKQSHDAQSFRGLRAKLYQKKRHAEKIEMKKRIRAQEEKNVKSSAPNEPSSTPLPNYLLDRSQETNAKSLSSAIKNKRAEKAAQFSVPLPKVKGISEEEMFKVVKTGKKTAKKSWKRMITKPTFVGADFTRRPVKYERFIRPMGLRYKKANVTHPKLGVTVQLPIISVKKNPQSPMYTQLGVLTKGTIIEVNVSELGQVTASGKVLWGKFAQITNN 248          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_EMENI (Ribosome biogenesis protein nsa2 OS=Emericella nidulans GN=nsa2 PE=3 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.715e-76
Identity = 138/243 (56.79%), Postives = 178/243 (73.25%), Query Frame = 2
Query:   14 DYIELHRKRNGYRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKR-RTKQWKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTN 739
            +YIE   K++G RLDH ER RK+EAR+ H++S+ AQ   G++ K++ +KR+AEK  M+K +   EE + +     E  +  +P YLLDR   T AK LS+ IK KR EKA K+ VPLPKV+ ++E+EMFKV+ +GK+   K WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHPE+  T  L I+ VKKNP  P+YT LGV+TKGT+IEVNVSELG+VT  GKV WGKYAQ+TN
Sbjct:    5 EYIERWTKQHGKRLDHDERVRKREARQSHQQSKDAQNLRGLRAKLYQQKRHAEKIQMRKRIKAQEEKNVKSSAPSEPSKTPLPQYLLDRSEATNAKALSSAIKDKRAEKAAKFAVPLPKVKGISEEEMFKVVNTGKKTHKKSWKRMITKPTFVGNDFTRRPVKYERFIRPMGLRYKKANVTHPEMAVTVQLPILSVKKNPQNPLYTQLGVLTKGTVIEVNVSELGIVTAGGKVAWGKYAQITN 247          
BLAST of DR908073 vs. ExPASy Swiss-Prot
Match: NSA2_COCIM (Ribosome biogenesis protein NSA2 OS=Coccidioides immitis GN=NSA2 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.145e-75
Identity = 140/233 (60.09%), Postives = 174/233 (74.68%), Query Frame = 2
Query:   47 YRLDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTRAKVLSNTIKQKRKEKAGKWEVPLPKVRPVAEDEMFKVIRSGKRRTKQ-WKRMVTKATFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNN 742
            + LDH ER RK+ ARE HK+S+ AQ   G++ K++ KKR+AEK  M+K +   EE   +    +E     +P YLLDR   T AK LS+ IK+KR EKA K+ VPLPKV+ ++E+EMFKV+++GK+ +K+ WKRM+TK TFVG  FTR+P KYERFIRP GLR+ KA+VTHPEL  T  L II VKKNP  PMYT LGV+TKGTIIEVNVSELGLVT  GKVVWGK+AQ+TNN
Sbjct:   14 FDLDHEERTRKRIARESHKQSQDAQTLRGLRAKLYHKKRHAEKIQMRKRIKAQEERDVKSAAPNEPSTTPLPQYLLDRSQATNAKALSSAIKEKRAEKAAKFSVPLPKVKGISEEEMFKVVKTGKKTSKKSWKRMITKPTFVGNDFTRRPVKYERFIRPMGLRYKKANVTHPELGVTVQLPIISVKKNPQSPMYTQLGVLTKGTIIEVNVSELGLVTAGGKVVWGKWAQITNN 246          
The following BLAST results are available for this feature:
BLAST of DR908073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
NSA2_PHANO2.486e-8060.66Ribosome biogenesis protein NSA2 OS=Phaeosphaeria ... [more]
NSA2_ASPFU7.234e-8059.11Ribosome biogenesis protein nsa2 OS=Aspergillus fu... [more]
NSA2_NEOFI1.612e-7959.67Ribosome biogenesis protein nsa2 OS=Neosartorya fi... [more]
NSA2_BOTFB2.105e-7960.74Ribosome biogenesis protein nsa2 OS=Botryotinia fu... [more]
NSA2_NEUCR3.039e-7857.79Ribosome biogenesis protein nsa-2 OS=Neurospora cr... [more]
NSA2_ASPCL3.969e-7859.09Ribosome biogenesis protein nsa2 OS=Aspergillus cl... [more]
NSA2_AJECN9.777e-7758.61Ribosome biogenesis protein NSA2 OS=Ajellomyces ca... [more]
NSA2_EMENI3.715e-7656.79Ribosome biogenesis protein nsa2 OS=Emericella nid... [more]
NSA2_COCIM3.145e-7560.09Ribosome biogenesis protein NSA2 OS=Coccidioides i... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16201 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-36_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908073 ID=DR908073; Name=DR908073; organism=Citrus sinensis; type=EST; length=743bp
AATTCGGCACGAGGATTACATAGAGCTTCACAGGAAGCGAAATGGCTACC
GTCTCGATCACTTCGAGCGCAAGCGCAAGAAGGAGGCGCGTGAAGTCCAT
AAGCGCTCCGAAATTGCCCAAAAGGCTTTGGGTATTAAGGGCAAGATGTT
TGCTAAAAAACGCTATGCTGAGAAGGCTCTCATGAAGAAAACTTTGGCTA
TGCATGAAGAGTCATCAAGTCGTAGAAAGGTGGATGATGAAGTTCAAGAG
GGTGCTGTTCCTGCTTATTTGCTTGATCGTGAAAACACAACAAGAGCAAA
GGTGCTTAGCAACACTATAAAGCAAAAAAGAAAAGAGAAAGCTGGAAAGT
GGGAGGTACCCCTTCCCAAGGTTAGGCCAGTAGCGGAAGATGAAATGTTT
AAAGTCATCAGATCTGGTAAACGAAGAACCAAGCAATGGAAGAGGATGGT
CACAAAGGCCACATTTGTTGGACCTGGTTTTACAAGAAAACCTCCCAAGT
ATGAGAGGTTCATTCGTCCTTCGGGTTTGCGTTTTACCAAAGCTCATGTA
ACTCACCCTGAACTTAAGTGCACCTTCAATCTTGAGATCATTGGAGTGAA
AAAGAATCCTAATGGTCCGATGTATACCTCTCTTGGTGTTATTACTAAGG
GGACGATCATTGAGGTGAATGTCAGTGAATTGGGTCTGGTAACACCAGCT
GGAAAAGTTGTGTGGGGAAAATATGCACAAGTGACAAATAATC
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