DR405869

Overview
NameDR405869
Unique NameDR405869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.010e-41
Identity = 92/155 (59.35%), Postives = 109/155 (70.32%), Query Frame = 3
Query:  228 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            M +  TD  +D  Q +L+ E  CIL+DEND  +G E K NCHL E IE   LLHRAFSVFLFN++ +LLLQQRS  K+T P  +TNTCCSHPL    EL E +ALGVR AAQR+L  ELGI  E+VP +E   L RI YKA SDG WGEHE+DY+
Sbjct:    1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYI 152          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 3
Query:  249 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            + +D  Q +L+ E  CIL+DEND  +G + K NCHL E I+   L+HRAFSVFLFN++ +LLLQQRS  K+TFP  +TN+CCSHPL    EL E +A+GV+ AAQR+L  ELGI  E+V ++E   L RI YKA SDG WGEHE+DY+
Sbjct:    7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYI 152          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = 3
Query:  255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            +D  Q +L+ E  CIL+DEND  +G + K NCHL E I+   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TN+CCSHPL    EL E NA+GV+ AA+R+L  ELGI  E+V ++E   L RI YKA SDG WGEHE+DY+
Sbjct:    9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYI 152          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 3
Query:  255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            +D  Q +L+ E  CIL+DEND  +G + K NCHL E I+   LLHRAFSVFLFN++ +LLLQQRS  K+TFP  +TN+CCSHPL    EL E +A+GV+ AAQR+L  ELGI  E+V  +E   L RI YKA SDG WGEHE+DY+
Sbjct:    9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYI 152          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37
Identity = 84/147 (57.14%), Postives = 100/147 (68.03%), Query Frame = 3
Query:  258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            D  Q RLM E+ CILV+ +D   G  +K  CHLM  I +  +LLHRAFSVFLF  S   LLLQ+R+  K+TFP +WTNTCCSHPL  + E+ EEN +GVR AA RKL  ELG+     P D FT L RI Y APSDG WGEHE+DY+
Sbjct:   23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYI 168          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37
Identity = 83/148 (56.08%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            D  Q RLM E+ CI+VDEND  + +  K  CHLME I    LLHRAFS+F+F+ +  LLLQQR+  K+TFP +WTNTCCSHPL    E    + E   GV+NAAQRKL  ELGI A+ +P D+F  L RI Y APS G WGEHE+DY+
Sbjct:   11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYI 156          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.661e-36
Identity = 80/152 (52.63%), Postives = 105/152 (69.08%), Query Frame = 3
Query:  243 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            +D  +D V RR +   E+  I+VDEND+V+G + K NCHL E IE   LLHRAFSV LFN+K  +L+QQRS TKVTFP  +T++C SHPLY  +EL E++A+GVR AAQR+L  ELGI  E +  ++   +    +KA SD  WGEHE+ YL
Sbjct:    2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYL 152          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 77/150 (51.33%), Postives = 107/150 (71.33%), Query Frame = 3
Query:  252 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYL 692
            G + +Q  LM ++ECI+VD +D+ +   +K   HLM  I +  LLHRAFS+FLFN + +LLLQQR+  K+TFP  WTNT CSHPL+   SEL+EENA GV+ AA+RKL  ELG+  + V +D+FT + +I YK+ S  D +WGEHE+D++
Sbjct:   15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHI 162          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 3
Query:  240 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYL 692
            T  +G D  Q +LM E+ CI++D +D  +G   K  CHLME IE   LLHRAFSVF+FN + ELLLQQR+  K+TFP +WTNTCCSHPL  + EL     +++   G   AA RKL  ELGI  ++     +F  L RI Y APS+  WGEHE+DY+
Sbjct:   57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYI 211          
BLAST of DR405869 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 3
Query:  285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692
            ++  ILVD +D  +G ++K   H         LLHRAFS+F+F+S+  LLLQQR+ +K     +WTN+CC HP + ES L          AAQR+L +E+G  AE   V  FT      Y+A   G   EHE D++
Sbjct:    2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHI 116          
The following BLAST results are available for this feature:
BLAST of DR405869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
IDI1_PONAB2.010e-4159.35Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo... [more]
IDI1_RAT1.103e-3956.08Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattu... [more]
IDI1_MOUSE1.103e-3957.53Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus m... [more]
IDI1_MESAU3.208e-3957.53Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesoc... [more]
IDI1_PHARH1.761e-3757.14Isopentenyl-diphosphate Delta-isomerase OS=Phaffia... [more]
IDI1_SCHPO6.690e-3756.08Isopentenyl-diphosphate Delta-isomerase OS=Schizos... [more]
IDI2_HUMAN9.661e-3652.63Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo ... [more]
IDI_DICDI4.487e-3351.33Isopentenyl-diphosphate Delta-isomerase OS=Dictyos... [more]
IDI1_YEAST3.799e-3250.32Isopentenyl-diphosphate Delta-isomerase OS=Sacchar... [more]
IDI_SERP52.024e-1739.71Isopentenyl-diphosphate Delta-isomerase OS=Serrati... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247P23 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247P23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405869 ID=DR405869; Name=DR405869; organism=Citrus sinensis; type=EST; length=692bp
GGGGTTGCCATATTGAGGTCCCAATGTCTACTACTACGCTTTATAACTGC
GCCACAACCAAACTCTGCTCCTCACTAATCAACAACTCTTCTTCTTTCTC
GAAGTCCCGTCTATTTTTCTCCTCTTCCCATTTCGCCCCTAGGGTTTCTT
CGATTCGCAGGCCTCTGTCCTTGGGAGGTGCCTCTCGTTCTAGCTCTTCT
TCTTCTTCCGCTCGCGCAATCAGCACTATGGGTGACGCTACTACTGATGC
CGGCATGGACGCTGTCCAGCGCCGCCTCATGTTTGAAGACGAATGCATTT
TGGTGGATGAGAATGATCGCGTTGTTGGTCATGAAAACAAATACAACTGT
CACTTGATGGAAAAGATTGAGTCTTTGAATTTGCTACACAGAGCCTTCAG
CGTATTTTTGTTTAACTCAAAATATGAGCTACTCCTTCAGCAACGCTCTG
GAACCAAAGTTACCTTCCCTCTTGTGTGGACTAACACCTGCTGCAGCCAT
CCTCTGTACCGTGAATCTGAGCTTATTGAGGAGAACGCTCTTGGGGTGAG
GAATGCTGCACAAAGAAAGCTTTTGGATGAGCTGGGCATTTGTGCTGAAG
ATGTGCCAGTTGATGAGTTCACTCCACTGGGTCGCATTCTGTACAAGGCC
CCTTCTGATGGCAAGTGGGGGGAGCATGAACTTGACTACTTA
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