DR405867

Overview
NameDR405867
Unique NameDR405867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROYA (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila yakuba GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 93/232 (40.09%), Postives = 132/232 (56.90%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila simulans GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 93/232 (40.09%), Postives = 132/232 (56.90%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila sechellia GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 93/232 (40.09%), Postives = 132/232 (56.90%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROME (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila melanogaster GN=eIF3-S5-1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 93/232 (40.09%), Postives = 132/232 (56.90%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROER (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila erecta GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40
Identity = 93/232 (40.09%), Postives = 132/232 (56.90%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROVI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.552e-40
Identity = 93/232 (40.09%), Postives = 131/232 (56.47%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L+  I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLELILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROMO (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.552e-40
Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M   + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  ++G   ++AY+ + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGRMGLRAYICIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VTVSPAHRPKTVAPMLDLAQISEAATKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROWI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.458e-40
Identity = 91/230 (39.57%), Postives = 132/230 (57.39%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758
            N+T +VHP+V+F + D + RR   + RVIGTLLGSV   G V++ N + VPH E  DQV  ++ Y   M + + KVN  E +VGW++TG  VT  S++IHE+Y RE  NPVH+TVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + +
Sbjct:    5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLI 232          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_ANOGA (Eukaryotic translation initiation factor 3 subunit F OS=Anopheles gambiae GN=eIF3-S5 PE=3 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40
Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 3
Query:   99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDI-LKSTSVDKLPS---------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764
            N+T +VHP+V+F I D Y RR   +ERVIGTLLGSV   G V++ N + +PH E +DQV  ++ Y   + + + +VN  E IVGW++TG  VT  S++IHE+Y RE  NPVHLT+DT        +KAYV V+L +   +    F  I +++   E E VG  + +K+  V   PS         DL  +    ++LL L++D+  YV+D +     P+N+VGR L + + S
Sbjct:    9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-DKGVVEVTNCFCLPHKEHTDQVEAELGYASDLYELNQRVNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGARMGIKAYVCVSLGVPGGKSGCMFTPINVEVTSYEPEIVGLQLCMKTIGVQSNPSRPRTVSPMLDLAQVTDASDKLLALLSDVLAYVEDVLSEKQQPENTVGRALLDLIHS 239          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.006e-39
Identity = 93/238 (39.08%), Postives = 144/238 (60.50%), Query Frame = 3
Query:   66 LQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLG-DRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758
            +Q   S  + S +T KVHP+VIFNI D Y+RR    +RVIGTLLG    DG ++IRN + V H+E ++Q+A+++EY   ML  HLK +P+E I+GW++TG  +   S  I+ FY  E+ N  P+HLTVDTG  N    + AY++ NLSL  +  L + F ++PL++   EAE  G + +  T  D+    L S+LE ++  + +L  ++  I  Y++   +G    D  +GR L++T+
Sbjct:    1 MQKETSIFLPSQVTVKVHPVVIFNILDHYIRRNVGQDRVIGTLLG-FNNDGVLEIRNCFPVVHSE-TEQIAVEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTI 236          
The following BLAST results are available for this feature:
BLAST of DR405867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
EI3F1_DROYA1.188e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROSI1.188e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROSE1.188e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROME1.188e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROER1.188e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROVI1.552e-4040.09Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROMO1.552e-4039.66Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROWI3.458e-4039.57Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_ANOGA4.516e-4039.22Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_DICDI1.006e-3939.08Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247P18 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247P18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405867 ID=DR405867; Name=DR405867; organism=Citrus sinensis; type=EST; length=765bp
GGGGGCTTTTTGAGTCGAGATCAGAAGAGAAGAAGATAAGAATGGCGGCA
AGCGACCGCACGGTGCTGCAATTCGGACCTTCATCAGCGGTGACGTCGAA
TATAACGGCGAAAGTTCACCCGCTGGTTATTTTCAACATCTCCGACTGTT
ACGTCAGACGCCCCGACCAAGCTGAACGCGTCATCGGCACGCTTCTTGGC
TCCGTTTTGCCTGATGGCACCGTCGATATCCGTAACTCCTACGTCGTTCC
TCACAACGAGTTCTCCGATCAGGTTGCATTGGATATTGAATACCATCATA
CCATGTTAAAGTCACACCTAAAGGTGAATCCTCAGGAAGTGATTGTTGGA
TGGTTTTCTACAGGGTTGGGAGTCACTGGTGGCAGTGCCTTGATCCATGA
ATTCTATTGTCGCGAAGTTCCTAATCCTGTCCACCTGACTGTAGATACAG
GATTCAGAAATGGAGAGGGTACTGTAAAAGCTTATGTTTCTGTCAATTTG
TCTCTTGGAGATCGACAGCTTGCTGCACAATTTCAAGAAATCCCTCTTGA
TCTTCGAATGATTGAAGCTGAGCGAGTTGGATTCGATATTCTGAAGTCAA
CATCGGTTGACAAACTCCCTAGTGATTTGGAAGGAATGGAAGTCCTGATG
GAACGGCTACTAACTCTTATTAACGATATCTACAAATATGTTGATGACAC
TGTGGAAGGGCATGCTGTACCTGATAATAGTGTAGGGCGTATTCTTTCAG
AGACTGTAGCCTCCC
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