DR405867

Overview
NameDR405867
Unique NameDR405867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.780e-20
Identity = 64/216 (29.63%), Postives = 108/216 (50.00%), Query Frame = 3
Query:  114 VHPLVIFNISDCYVR-RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSV-NLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSV 734
            VHP V+ ++ D Y R   D  +RV+G LLGS    G VD+ N Y +P  E         LD  +H  M     K+N +E +VGW+STG  +      I+E + R  PNPV + +D   +      K+YV+V  ++    +   +FQ IP  +  +EAE +  + L    K +S+  L + +   ++ ++ LLT + ++  Y+    +G   P++ +
Sbjct:   10 VHPTVLLSVVDHYNRVAKDTNKRVVGALLGSN-NKGVVDVSNCYGLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMRFQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQI 224          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_MAGGR (Eukaryotic translation initiation factor 3 subunit F OS=Magnaporthe grisea GN=MGG_10653 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.973e-19
Identity = 72/245 (29.39%), Postives = 124/245 (50.61%), Query Frame = 3
Query:   84 SAVTSNITAKVHPLVIFNISDCYVRRP---DQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCR----EVPNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ--FQEIP--------LDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVA 761
            +A  + +T  + P  I +I D  VRR     QA RVIG L+G    DGT V++R+++ +PH E  DQV +D+EY   ML   LK +P+E ++GW++T   +   SALI  F+        P+P VHLT+ T     +   + Y+S   ++   + A    F ++P         D   +EA   G D    T+   + SD+E +   +E+ + +++   +YV   ++    P +++G+ L   ++
Sbjct:   23 NANVAPLTVTIQPQAILSILDHAVRRDIRDTQATRVIGALVGVRSEDGTDVEVRSTFAIPHTENEDQVEVDVEYQKNMLALTLKASPRESLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLTMSTD-PGADIEPRCYISAPAAVSPDRAAESCFFIQVPHRTPPTNESDRAALEAIAAGKDDEARTA--PVLSDVEALARSLEQTIDMLDRTSEYVGAVLDEEREPSHALGQYLMNNLS 264          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 65/209 (31.10%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  114 VHPLVIFNISDCYVR-RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ--FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG 710
            VHPLV+ +I D Y R   D ++RV+G LLGS    G VD+ NSY VP  E     +   LD  YH +M     ++N +E +VGW+STG  +      +H  +   VPNPV + +D   +      KAY +V     +    +Q  F  +  ++   E E +G + L    K T++  L +++      ++ L   + +I  Y+D  +EG
Sbjct:   19 VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSS-SRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEG 226          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_CAEEL (Eukaryotic translation initiation factor 3 subunit F OS=Caenorhabditis elegans GN=eif-3.F PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18
Identity = 66/251 (26.29%), Postives = 115/251 (45.82%), Query Frame = 3
Query:   90 VTSNITAKVHPLVIFNISDCYVRRPDQA------ERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYC---------REVPNPVHLTVDTGFRNGEG---TVKAYVSVNLSL--GDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK-----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVP-DNSVGRILSETVAS 764
            + SN+T  VHP V  N+ D ++RR   +      E+ +GTL+G     G++ + N + +P NE +D + +D +++  M+ +  K +P E  VGWF T   +T    + H++Y          RE P  V LT+DT F         V+AY+     +        A F  + ++L     E V   +++     +     L S LE +E    +++  +  +  YV+D  +    P D  +GR L + V +
Sbjct:    1 MASNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMG-YYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEKALDSRRREATLESGLEQLETSTAQMIEWLERMLHYVEDVNKNGEKPGDAQIGRQLMDIVTA 250          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6)

HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16
Identity = 65/215 (30.23%), Postives = 105/215 (48.84%), Query Frame = 3
Query:   78 PSSAVTSNITAKVHPLVIFNISDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ-FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYV 692
            PS  V+ N    VHPLV+ ++ D + R  +    +RV+G LLG     G +D+ NS+ VP +E     +   LD +Y   M     KVN +E +VGW+ TG  +      I+E   R  PN V + +D   ++     +AY+SV     D    ++ F+ +P ++   EAE VG + L    K T+V  L   +    + ++ L   + DI +Y+
Sbjct:    2 PSQEVSVNKVI-VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYL 215          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum GN=csn6 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 61/214 (28.50%), Postives = 103/214 (48.13%), Query Frame = 3
Query:   84 SAVTSNITAKVHPLVIFNISDCYVRRPDQAE-----RVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD-ILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVE 707
            SA +S +   +HPLV+ NISD + R   Q+      RVIG +LG V     V+I NS+ + +     Q+ LDIEY   + K + ++ P   ++GW+STG  V+    L+H+       +P++L +DT     +          L + + +    F + P  ++  EAER+G + I K T      S L      M   ++++N   K + D ++
Sbjct:   20 SANSSGLEVDLHPLVLINISDHFTRTKVQSNYQDNCRVIGVILG-VQNGRNVEICNSFEMVYATVDKQLVLDIEY---LRKKYEQLFPLYDLLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSGSEGSGLTSHLFTMHNAISMLNIRVKALSDYLQ 229          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_PONAB (COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 49/181 (27.07%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   54 DRTVLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587
            D  V+    +S VT +++  +HPLVI NISD ++R   Q  R   VIG L+G       +++ NS+ +  +   +++ +D EY++T  +   +V  +   +GW++TG         +H+  C  + +P+ L ++   ++ +  V  + SV + + + +    F E+   L   EAER+G D
Sbjct:   24 DAAVVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQ-EGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESV-IDIINGEATMLFAELTYTLATEEAERIGVD 202          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_PIG (COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 49/181 (27.07%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   54 DRTVLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587
            D  V+    +S VT +++  +HPLVI NISD ++R   Q  R   VIG L+G       +++ NS+ +  +   +++ +D EY++T  +   +V  +   +GW++TG         +H+  C  + +P+ L ++   ++ +  V  + SV + + + +    F E+   L   EAER+G D
Sbjct:   19 DAAVVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQ-EGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESV-IDIINGEATMLFAELTYTLATEEAERIGVD 197          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_BOVIN (COP9 signalosome complex subunit 6 OS=Bos taurus GN=COPS6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 49/181 (27.07%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   54 DRTVLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587
            D  V+    +S VT +++  +HPLVI NISD ++R   Q  R   VIG L+G       +++ NS+ +  +   +++ +D EY++T  +   +V  +   +GW++TG         +H+  C  + +P+ L ++   ++ +  V  + SV + + + +    F E+   L   EAER+G D
Sbjct:   20 DAAVVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQ-EGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESV-IDIINGEATMLFAELTYTLATEEAERIGVD 198          
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_MOUSE (COP9 signalosome complex subunit 6 OS=Mus musculus GN=Cops6 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 47/172 (27.33%), Postives = 90/172 (52.33%), Query Frame = 3
Query:   81 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587
            +S VT +++  +HPLVI NISD ++R   Q  R   VIG L+G       +++ NS+ +  +   +++ +D EY++T  +   +V  +   +GW++TG         +H+  C  + +P+ L ++   ++ +  V  + SV + + + +    F E+   L   EAER+G D
Sbjct:   29 ASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQ-EGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESV-IDIINGEATMLFAELTYTLATEEAERIGVD 198          
The following BLAST results are available for this feature:
BLAST of DR405867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
PSD7_DICDI6.780e-2029.6326S proteasome non-ATPase regulatory subunit 7 OS=... [more]
EIF3F_MAGGR1.973e-1929.39Eukaryotic translation initiation factor 3 subunit... [more]
PSD7_ARATH9.790e-1931.10Probable 26S proteasome non-ATPase regulatory subu... [more]
EIF3F_CAEEL8.288e-1826.29Eukaryotic translation initiation factor 3 subunit... [more]
PSD7_DROME7.757e-1630.2326S proteasome non-ATPase regulatory subunit 7 OS=... [more]
CSN6_DICDI5.559e-1428.50COP9 signalosome complex subunit 6 OS=Dictyosteliu... [more]
CSN6_PONAB1.238e-1327.07COP9 signalosome complex subunit 6 OS=Pongo abelii... [more]
CSN6_PIG1.238e-1327.07COP9 signalosome complex subunit 6 OS=Sus scrofa G... [more]
CSN6_BOVIN1.617e-1327.07COP9 signalosome complex subunit 6 OS=Bos taurus G... [more]
CSN6_MOUSE2.112e-1327.33COP9 signalosome complex subunit 6 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247P18 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247P18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405867 ID=DR405867; Name=DR405867; organism=Citrus sinensis; type=EST; length=765bp
GGGGGCTTTTTGAGTCGAGATCAGAAGAGAAGAAGATAAGAATGGCGGCA
AGCGACCGCACGGTGCTGCAATTCGGACCTTCATCAGCGGTGACGTCGAA
TATAACGGCGAAAGTTCACCCGCTGGTTATTTTCAACATCTCCGACTGTT
ACGTCAGACGCCCCGACCAAGCTGAACGCGTCATCGGCACGCTTCTTGGC
TCCGTTTTGCCTGATGGCACCGTCGATATCCGTAACTCCTACGTCGTTCC
TCACAACGAGTTCTCCGATCAGGTTGCATTGGATATTGAATACCATCATA
CCATGTTAAAGTCACACCTAAAGGTGAATCCTCAGGAAGTGATTGTTGGA
TGGTTTTCTACAGGGTTGGGAGTCACTGGTGGCAGTGCCTTGATCCATGA
ATTCTATTGTCGCGAAGTTCCTAATCCTGTCCACCTGACTGTAGATACAG
GATTCAGAAATGGAGAGGGTACTGTAAAAGCTTATGTTTCTGTCAATTTG
TCTCTTGGAGATCGACAGCTTGCTGCACAATTTCAAGAAATCCCTCTTGA
TCTTCGAATGATTGAAGCTGAGCGAGTTGGATTCGATATTCTGAAGTCAA
CATCGGTTGACAAACTCCCTAGTGATTTGGAAGGAATGGAAGTCCTGATG
GAACGGCTACTAACTCTTATTAACGATATCTACAAATATGTTGATGACAC
TGTGGAAGGGCATGCTGTACCTGATAATAGTGTAGGGCGTATTCTTTCAG
AGACTGTAGCCTCCC
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