DR405867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.759e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 114 VHPLVIFNISDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG 710 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRSYLEKVASG 218
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 114 VHPLVIFNISDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG 710 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRSYLEKVATG 218
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_HUMAN (COP9 signalosome complex subunit 6 OS=Homo sapiens GN=COPS6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 48/181 (26.52%), Postives = 92/181 (50.83%), Query Frame = 3 Query: 54 DRTVLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587 D V+ + VT +++ +HPLVI NISD ++R Q R VIG L+G +++ NS+ + + +++ +D EY++T + +V + +GW++TG +H+ C + +P+ L ++ ++ + V + SV + + + + F E+ L EAER+G D Sbjct: 23 DAAVVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQ-EGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESV-IDIINGEATMLFAELTYTLATEEAERIGVD 201
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 114 VHPLVIFNISDCYVR--RPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGD-RQLAAQFQEIPLDLRMIEAERVGFDIL----KSTSV----DKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG 710 VHPLV+ ++ D + R + +RV+G LLGS +D+ NS+ VP +E + LD +Y M KVN +E IVGW+ TG + I+E R PN V + +D ++ +AY+SV D + F+ + ++ EAE VG + L K T+V ++ + + G++ L +LL DI Y++ G Sbjct: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS-WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLL----DIRGYLEKVATG 218
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 60/221 (27.15%), Postives = 103/221 (46.61%), Query Frame = 3 Query: 84 SAVTSNITAK---VHPLVIFNISDCYVRRPDQAER-VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ-FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG 710 S+ TS I + VHPLV+ + D Y R +R V+G LLG D V++ NSY +P E + LD + +M + K+N E +VGW+ TG + I+ + +PNPV + +D ++ AY +++ D +++ F +P + EAE +G + L + SV L + + ++ L + +I Y+ V+G Sbjct: 6 SSETSTIVPQQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGD-VVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDDGSKSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGTLATRVTQQAQSLQGLGQRLTEIADYLRKVVDG 225
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_XENLA (COP9 signalosome complex subunit 6 OS=Xenopus laevis GN=cops6 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12 Identity = 59/229 (25.76%), Postives = 107/229 (46.72%), Query Frame = 3 Query: 81 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL----------KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDN 728 + VT ++T +HPLVI NISD ++R Q R VIG L+G +++ NS+ + +++ ++ EY++T + +V +GW++TG +H+ C + +P+ L ++ ++ + V Y SV + + + + E+ L EAER+G D + ST + L + +++L R + I +YV EG VP N Sbjct: 23 AQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQ-EGRNIEVMNSFELLSQINDEKITINKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVYESV-IDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSR----VRLILEYV-RAAEGGEVPFN 244
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: CSN6_XENTR (COP9 signalosome complex subunit 6 OS=Xenopus tropicalis GN=cops6 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12 Identity = 46/172 (26.74%), Postives = 86/172 (50.00%), Query Frame = 3 Query: 81 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAER---VIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFD 587 + VT ++T +HPLVI NISD ++R Q R VIG L+G +++ NS+ + +++ ++ EY++T + +V +GW++TG +H+ C + +P+ L ++ ++ + V Y SV + + + + E+ L EAER+G D Sbjct: 24 AQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQ-EGRNIEVMNSFELLSQINEEKITINKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVYESV-IDIVNGEATMLLAELSYTLATEEAERIGVD 193
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11 Identity = 62/227 (27.31%), Postives = 103/227 (45.37%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVR---RPDQAERVIGTLLGSVLPDG-TVDIRNSYVVPHNEFSDQVA---LDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQ-FQEIPLDLRMIEAERVGFDIL----KSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEG-----HAVPDN 728 N + V PLV+ ++ D Y R +++RV+G LLG DG V + NS+ VP E + LD Y +M KVN +E ++GW+ +G + I+E + R PNP+ + VD + AY +V+ D ++ F P + EAE +G + L + +V L + + ++ L + DI Y+ ++G HA+ N Sbjct: 13 NRSVSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQ--NDGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTSKTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGTLSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAILGN 237 The following BLAST results are available for this feature:
BLAST of DR405867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405867 ID=DR405867; Name=DR405867; organism=Citrus sinensis; type=EST; length=765bpback to top |