DR405861

Overview
NameDR405861
Unique NameDR405861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H33_PICGU (Histone H3.3 OS=Pichia guilliermondii GN=HHT3 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.399e-53
Identity = 107/136 (78.68%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H33B_LILLO (Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2 SV=3)

HSP 1 Score: 209.534 bits (532), Expect = 1.399e-53
Identity = 110/137 (80.29%), Postives = 115/137 (83.94%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPA-TGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLATKAARKS P   GG+K+P R+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRF                 G+FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSIPTGMGGMKRPRRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEGAEAYLVGIFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H3_COCIM (Histone H3 OS=Coccidioides immitis GN=HHT1 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.827e-53
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQ+A KAARK+AP+TGGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQIAAKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H3L_HUMAN (Histone H3-like OS=Homo sapiens PE=1 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 1.827e-53
Identity = 111/136 (81.62%), Postives = 114/136 (83.82%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLATKAARKS P+T GVK PHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDF TDLRF                 GL EDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H33_CANAL (Histone H3.3 OS=Candida albicans GN=HHT3 PE=3 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 1.827e-53
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRF                 GLFEDTNLCAIHAKRVTI  KD+QLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDMQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H3_AJECA (Histone H3 OS=Ajellomyces capsulata GN=HHT1 PE=3 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 3.117e-53
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARK+AP+TGGVKKPHR++PG VALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGAVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H33_PICST (Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H33_DEBHA (Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRF                  LFEDTNLCAIHAKRVTI  KDIQLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53
Identity = 106/135 (78.52%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 477
            MARTKQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHRFRPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRF                 GLFEDTNLCAIHA+RVTIM KD+QLARRIRGER
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
[Close]
BLAST of DR405861 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.071e-53
Identity = 106/135 (78.52%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 477
            MARTKQTARKSTG KAPRKQLA+KAARKSAPATGG+KKPHRFRPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRF                 GLFEDTNLCAIHA+RVTIM KD+QLARRIRGER
Sbjct:    1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
The following BLAST results are available for this feature:
BLAST of DR405861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_PICGU1.399e-5378.68Histone H3.3 OS=Pichia guilliermondii GN=HHT3 PE=3... [more]
H33B_LILLO1.399e-5380.29Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2... [more]
H3_COCIM1.827e-5377.94Histone H3 OS=Coccidioides immitis GN=HHT1 PE=3 SV... [more]
H3L_HUMAN1.827e-5381.62Histone H3-like OS=Homo sapiens PE=1 SV=3[more]
H33_CANAL1.827e-5377.94Histone H3.3 OS=Candida albicans GN=HHT3 PE=3 SV=3[more]
H3_AJECA3.117e-5377.94Histone H3 OS=Ajellomyces capsulata GN=HHT1 PE=3 S... [more]
H33_PICST4.071e-5377.94Histone H3.3 OS=Pichia stipitis GN=HHT3 PE=3 SV=1[more]
H33_DEBHA4.071e-5377.94Histone H3.3 OS=Debaryomyces hansenii GN=HHT3 PE=3... [more]
H31_TETTH4.071e-5378.52Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1... [more]
H31_TETPY4.071e-5378.52Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247P05 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247P05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405861 ID=DR405861; Name=DR405861; organism=Citrus sinensis; type=EST; length=705bp
GGGGGATCTTTCAATTTTCATTCATATTTTAAGATCTCCCAAGAAAAAAG
AAACACTTAATTTCCCAAATCAATGGCCCGCACGAAGCAAACCGCTCGCA
AGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCAAGGCGGCA
AGGAAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCACAGGTTCCG
TCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACTG
AGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGGAAATCGCT
CAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTTGCTGCACT
TCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGACACCAACC
TCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGGACATTCAG
CTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGGAACTTTCTGATTTAAT
GTATTTTGTTCCTCTTACTTCGATGTTAGTCTTTTGGTCAATATTTGGGG
TTTAGATTTATTGTTTGGATGTCTATCCGATGGATTAGATCGGGTNNNGT
ATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAATCTAATA
GATAATTAGCCTTTTAATATTTTTTTGAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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