DR405856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_STRCO (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces coelicolor GN=idi PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 53/154 (34.42%), Postives = 72/154 (46.75%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYKYV 758 LVDEN +G K + H + LHRAFSVFLF+ + LL+QQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P E E ++L + + P+P+EVA +V Sbjct: 24 LVDENGVTIGTAEKLSAH-----QPPGRLHRAFSVFLFDERGRLLIQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTFEELG-----VSPSLLAEAGTVRYNHPDPASGLVEQEYNHLFVGLVQAELRPDPEEVAGTAFV 158
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_STRGG (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=idi PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 52/154 (33.77%), Postives = 72/154 (46.75%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYKYV 758 LVDEN +G K H ++ LHRAFSVFLF+ + LLLQ+R+ K P VW+NTCC HP E+ AA R+ +ELG+ G + Y P E E ++L + + P+P+EV E +V Sbjct: 24 LVDENGTTIGTAEKLAAH-----QAPGQLHRAFSVFLFDEQGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELGLSP-----SLLAEAGTVRYNHPDPASGLVEQEFNHLFVGLAQTAPKPDPEEVGETAFV 158
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_SACEN (Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=idi PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVA 743 ++ +L++++ + +G +K H ++ LH AFS ++FN + +LLL QR+ K T+P VWTNTCC HP +E+ + A R+L +ELG+ D+ + L R Y+A E+E+ + D PN +EVA Sbjct: 2 EQVVLLNDSGQAIGVTDKATVHHLD-----TPLHLAFSCYVFNGRGQLLLTQRAHEKRTWPGVWTNTCCGHPAPQEA---------MPEAITRRLGEELGLTVRDLTL----VLPRFRYRAVMGNGVVENEICPVFAAFTDDEPAPNREEVA 135
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_HALHL (Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=idi PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 54/150 (36.00%), Postives = 72/150 (48.00%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL-LFIVRDVSVNPNPD 734 + ++VD + VG E K H LH AF VF+FN + ELLLQ+R+ +K F +W+NTCC HP E GV AA+R+L +E G PV +FT Y A D G E +Y + I R + P PD Sbjct: 2 EHVVIVDPEGQRVGTEEKIRAHA-----DGGTLHLAFCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHPRPGE---------GVTEAAERRLGEEFGFVTRLHPVAQFT------YHA-EDHHTGLAEYEYAHVLIGRAPTDQPAPD 130
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_STRAW (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces avermitilis GN=idi PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12 Identity = 52/154 (33.77%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS-DGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYV 758 LVDEN +G K H + LHRAFSVFLF+ + LLLQQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P D E E ++L + + P+ +E+ + +V Sbjct: 24 LVDENGTTIGTAEKLAAH-----QPPGQLHRAFSVFLFDEQGRLLLQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELG-----VSPSLLAEAGTVRYNHPDPDSGLVEQEFNHLFVGLVQSPLRPDAEEIGDTAFV 158
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_KLEP7 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=idi PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.492e-11 Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 279 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV-PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYKYV 758 M + IL+DE D+ G KY H + LH AFS +LFN + +LL+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ D+ PV P R Y+A + E+E+ ++ R VS V PN DEV +Y++V Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTFD-----TPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGVEISDIAPVH---PAFR--YRAVAPNGIVENEV-CPVYAARVVSEVQPNDDEVMDYQWV 142
BLAST of DR405856 vs. ExPASy Swiss-Prot
Match: IDI_KLEP3 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae (strain 342) GN=idi PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 279 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYKYV 758 M + IL+DE D+ G KY H ++ LH AFS +LFN + + L+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ E + P R Y+A + E+E+ ++ R VS V PN DEV +Y++V Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTLD-----TPLHLAFSCWLFNQQGQFLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGV--EIADIAPIHPAFR--YRAVAPNGIVENEV-CPVYAARVVSQVQPNDDEVMDYQWV 142 The following BLAST results are available for this feature:
BLAST of DR405856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405856 ID=DR405856; Name=DR405856; organism=Citrus sinensis; type=EST; length=758bpback to top |