DR405849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43 Identity = 94/163 (57.67%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 228 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS 716 M + TD +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V+ Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVT 160
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41 Identity = 86/156 (55.13%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 249 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS 716 + +D Q +L+ E CIL+DEND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V+ Sbjct: 7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVT 160
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41 Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS 716 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V+ Sbjct: 9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVT 160
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41 Identity = 87/154 (56.49%), Postives = 112/154 (72.73%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS 716 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V +E L RI YKA SDG WGEHE+DY+LF+ ++V+ Sbjct: 9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVT 160
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.287e-38 Identity = 86/149 (57.72%), Postives = 102/149 (68.46%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLF 698 D Q RLM E+ CILV+ +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y APSDG WGEHE+DY+LF Sbjct: 23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILF 170
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.890e-38 Identity = 85/150 (56.67%), Postives = 103/150 (68.67%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLF 698 D Q RLM E+ CI+VDEND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQRKL ELGI A+ +P D+F L RI Y APS G WGEHE+DY+LF Sbjct: 11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILF 158
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.139e-37 Identity = 82/160 (51.25%), Postives = 111/160 (69.38%), Query Frame = 3 Query: 243 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS 716 +D +D V RR + E+ I+VDEND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ + +KA SD WGEHE+ YLL + ++V+ Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVT 160
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.511e-34 Identity = 79/156 (50.64%), Postives = 111/156 (71.15%), Query Frame = 3 Query: 252 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD 710 G + +Q LM ++ECI+VD +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL ELG+ + V +D+FT + +I YK+ S D +WGEHE+D++L + +D Sbjct: 15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKD 168
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.777e-33 Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 240 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYLLF 698 T +G D Q +LM E+ CI++D +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL +++ G AA RKL ELGI ++ +F L RI Y APS+ WGEHE+DY+LF Sbjct: 57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILF 213
BLAST of DR405849 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17 Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL 692 ++ ILVD +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+G AE V FT Y+A G EHE D++ Sbjct: 2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHI 116 The following BLAST results are available for this feature:
BLAST of DR405849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405849 ID=DR405849; Name=DR405849; organism=Citrus sinensis; type=EST; length=716bpback to top |