DR405847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405847 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 519 SLIHAQSILAIWACQVVLMGAVEGYRI---AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 710 +LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLADDP+ F ELKVKE Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKE 70
BLAST of DR405847 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 62/149 (41.61%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 264 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGAKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL---GEVTDPLYPGGSFDPLGLADDPEAFAELK 701 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL NGA F +W K F A+ A QVV +E +R GG L E D YPG FDPL L + AE+K Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAWF--QIWDKVDFNRF--------------------AVVALQVV--APLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTEYTKEAEIK 501 HSP 2 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 55/152 (36.18%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 255 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGAKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG---PLGEVTDPLYPGGSFDPLGLADDPEAFAELK 701 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + L + + + E +R GG GE+ D YPG FDPL L D AE+K Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGEL-DRSYPG--FDPLNLTTDYTRAAEVK 316 HSP 3 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 267 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGAKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-YRIAGGPLGEVTDP--LYPGGSFDPLGLADDPEAFAELK 701 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L G+ +W++A I +V + A G + +A G + E +DP +YPG FDPL L D AE+K Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQN---------------------AGIGLKEVAIFTAAYGVFEVARG-VKENSDPTTIYPG--FDPLNLTTDYTKEAEIK 128
BLAST of DR405847 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 70/212 (33.02%), Postives = 95/212 (44.81%), Query Frame = 3 Query: 159 GGRISMRKTASKSV---SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGAKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKE 710 G RIS T S ++ +P + L S + SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + PE+L + G E WF+ G I G +Y + ++ ++ LMG E R LG DP YPGG F+PLG D ++ ELK+KE Sbjct: 24 GSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKE 225
BLAST of DR405847 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 70/204 (34.31%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 174 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLARNGAKFGEA--VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGE------------VTDPLYPGGS-FDPLGLADDPEAFAELKVKE 710 +R A+ V G G DR + S + SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L + G E WF+ G I G +Y + ++ ++ LMG E R G +G+ +P YPGG F+PLG D ++ ELK+KE Sbjct: 40 VRAAATPPVKQG----GVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKE 227
BLAST of DR405847 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 50/144 (34.72%), Postives = 68/144 (47.22%), Query Frame = 3 Query: 267 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGAKFGEAVWFKAG-AQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG---YRIAGGPLGEVTDPLYPGGSFDPLGLADDPEA 686 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G W+ AG Q F+ ++ L H I W + G+V ++ P GEV YPGG F+PL A EA Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPKGEVG---YPGGIFNPLNFAPTQEA 201 The following BLAST results are available for this feature:
BLAST of DR405847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405847 ID=DR405847; Name=DR405847; organism=Citrus sinensis; type=EST; length=711bpback to top |