DR405838

Overview
NameDR405838
Unique NameDR405838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.175e-35
Identity = 73/151 (48.34%), Postives = 104/151 (68.87%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN++DAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                    F EAT++  + F+ A+FDGI+G+G+  I+V   +PV+DN+++Q LV++
Sbjct:   71 LKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNKVLPVFDNLMKQKLVEK 221          

HSP 2 Score: 23.0978 bits (48), Expect = 1.175e-35
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + +FSF+LNRD
Sbjct:  214 MKQKLVEKNIFSFYLNRD 231          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.178e-35
Identity = 74/155 (47.74%), Postives = 102/155 (65.81%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFS----------QXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G +  I+YGSGS+SG+ S                         F EAT++  LTF+ A+FDGI+G+ +  I+V + VPV+DN+++Q LV +
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVFDNLMQQKLVDK 161          

HSP 2 Score: 23.8682 bits (50), Expect = 1.178e-35
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  +++FSF+LNRD
Sbjct:  154 MQQKLVDKDIFSFYLNRD 171          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.994e-35
Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ-----------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                         F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLV 224          

HSP 2 Score: 21.557 bits (44), Expect = 1.994e-35
Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + +FSF+L+RD
Sbjct:  219 MQQKLVDQNIFSFYLSRD 236          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.994e-35
Identity = 72/154 (46.75%), Postives = 104/154 (67.53%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN++DAQY+G+IGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  + F+ A+FDGI+G+G+  I+V + +PV+DN+++Q LV +
Sbjct:   71 LKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDK 224          

HSP 2 Score: 23.0978 bits (48), Expect = 1.994e-35
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + +FSF+LNRD
Sbjct:  217 MQQKLVDKNIFSFYLNRD 234          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.197e-34
Identity = 70/154 (45.45%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGS+NLWVPS  C    I+C+ H +Y S KS+TY + G + +I+YGSGS+SG+ SQ                       F EA ++  + F+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV +
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDK 204          

HSP 2 Score: 23.0978 bits (48), Expect = 6.197e-34
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            + + L  + VFSF+LNRD
Sbjct:  197 MQQKLVDKNVFSFFLNRD 214          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.051e-33
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVK 720
            L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QGL+K
Sbjct:   72 LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DVITVGGITVTQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQGLLK 214          

HSP 2 Score: 25.7942 bits (55), Expect = 1.051e-33
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            +S+ L  E+VFSF+ NRD
Sbjct:  208 ISQGLLKEDVFSFYYNRD 225          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.054e-33
Identity = 81/185 (43.78%), Postives = 107/185 (57.84%), Query Frame = 1
Query:  184 HSLNAARITRKERYMGGAGVSGVHHRLGD-------SDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLV 717
            H+++A      ++YMG      VH  L +       S  D+L + NF++AQYF EI +G+PPQ F V+ DTGSSNLWVP S C  SI+C+ H++Y S  S+TY   G    I YGSG +SGF SQ              F EAT E  L F   RFDGI+GLG+  I+V   VP + NM++QGL+
Sbjct:   37 HNIDAHVRALGQKYMGIR--PNVHQELLEENSLNDMSRHDVL-VDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCS-SIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVPPFYNMLDQGLL 217          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.369e-33
Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 1
Query:  292 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVKR 723
            LKN++DAQY+GEIG+G+PPQ F+V+FDTGSSNLWVPS  C    I+C  H +Y S KS+TY + G +  I YGSGS+SG+ SQ              F EA ++  + F+ A+FDGI+G+ +  I+V    PV+DN++ Q  V++
Sbjct:   68 LKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVAPVFDNIMSQKKVEQ 212          

HSP 2 Score: 21.1718 bits (43), Expect = 1.369e-33
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            +S+    + VFSF+LNR+
Sbjct:  205 MSQKKVEQNVFSFYLNRN 222          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.321e-33
Identity = 67/154 (43.51%), Postives = 98/154 (63.64%), Query Frame = 1
Query:  262 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVK 720
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QG++K
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLK 220          

HSP 2 Score: 24.6386 bits (52), Expect = 2.321e-33
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            +S+ +  E+VFSF+ NRD
Sbjct:  214 ISQGVLKEDVFSFYYNRD 231          
BLAST of DR405838 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.321e-33
Identity = 67/154 (43.51%), Postives = 98/154 (63.64%), Query Frame = 1
Query:  262 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVK 720
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QG++K
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLK 220          

HSP 2 Score: 24.6386 bits (52), Expect = 2.321e-33
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  701 LSRALXSEEVFSFWLNRD 754
            +S+ +  E+VFSF+ NRD
Sbjct:  214 ISQGVLKEDVFSFYYNRD 231          
The following BLAST results are available for this feature:
BLAST of DR405838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CATD_RAT1.175e-3548.34Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CATD_PIG1.178e-3547.74Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CATD_HUMAN1.994e-3548.05Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_MOUSE1.994e-3546.75Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_BOVIN6.197e-3445.45Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
RENI_CALJA1.051e-3345.83Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CARP_ASPFU1.054e-3343.78Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CATD_CHIHA1.369e-3346.90Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
RENI_PANTR2.321e-3343.51Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_HUMAN2.321e-3343.51Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247N14 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247N14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405838 ID=DR405838; Name=DR405838; organism=Citrus sinensis; type=EST; length=754bp
GGGGACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGAAA
ACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTAT
GGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGG
AGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCTGC
AAGAATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCG
TGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAAC
TTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACA
AAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCAT
CTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAG
TCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAA
CTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAG
TTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAA
GGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGG
GTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGG
TTGAGCAGGGCCTTGTNAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAG
GGAT
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