DR405783

Overview
NameDR405783
Unique NameDR405783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_PANGI (ATP synthase subunit a, chloroplastic OS=Panax ginseng GN=atpI PE=3 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 3.743e-109
Identity = 196/226 (86.73%), Postives = 203/226 (89.82%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYW+IGGFQVH QVLITSWVVIAILLGSA IAVRNPQT+PT  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFG+ILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWKIGGFQVHGQVLITSWVVIAILLGSATIAVRNPQTIPTGGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGDILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_BARVE (ATP synthase subunit a, chloroplastic OS=Barbarea verna GN=atpI PE=3 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 3.743e-109
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSA IA+RNPQT+PT  QNFFE+VLEFIRDVS+TQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVIAIRNPQTIPTDGQNFFEFVLEFIRDVSQTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_OLIPU (ATP synthase subunit a, chloroplastic OS=Olimarabidopsis pumila GN=atpI PE=3 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 4.888e-109
Identity = 196/226 (86.73%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGS+ +A+RNPQT+PT  QNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSSVLAIRNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_DRANE (ATP synthase subunit a, chloroplastic OS=Draba nemorosa GN=atpI PE=3 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 4.888e-109
Identity = 197/226 (87.17%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSA +AVRNPQT+PT  QNFFE+VLEFIRDVS+TQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLAVRNPQTIPTDGQNFFEFVLEFIRDVSQTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_AETGR (ATP synthase subunit a, chloroplastic OS=Aethionema grandiflora GN=atpI PE=3 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 4.888e-109
Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSA + VRNPQT+PT  QNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLVVRNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_RANMC (ATP synthase subunit a, chloroplastic OS=Ranunculus macranthus GN=atpI PE=3 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.384e-109
Identity = 196/226 (86.73%), Postives = 202/226 (89.38%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVHAQVLITSW VIAILLGSA IAVRNPQT+PT  QNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALAL TS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWFVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_LEPVR (ATP synthase subunit a, chloroplastic OS=Lepidium virginicum GN=atpI PE=3 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.384e-109
Identity = 196/226 (86.73%), Postives = 204/226 (90.27%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSA +A+RNPQT+PT  QNFFE+VLEFIRDVS+TQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLAIRNPQTIPTDGQNFFEFVLEFIRDVSQTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_CAPBU (ATP synthase subunit a, chloroplastic OS=Capsella bursa-pastoris GN=atpI PE=3 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.384e-109
Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLY+ISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSA +A+RNPQT+PT  QNFFE+VLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKII+LP GELAAPTNDINTTVALALLTS AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   15 GLYEISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLAIRNPQTIPTDGQNFFEFVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 240
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_MORIN (ATP synthase subunit a, chloroplastic OS=Morus indica GN=atpI PE=3 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.338e-109
Identity = 195/226 (86.28%), Postives = 203/226 (89.82%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQH YW+IGGFQVHAQVLITSWVVIAILLGS+ IAVRNPQT+PT  QNFFEYVLEFIRDVS+TQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGL+KKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHLYWKIGGFQVHAQVLITSWVVIAILLGSSIIAVRNPQTIPTDGQNFFEYVLEFIRDVSRTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 238
[Close]
BLAST of DR405783 vs. ExPASy Swiss-Prot
Match: ATPI_FAGEA (ATP synthase subunit a, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=atpI PE=3 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.338e-109
Identity = 197/226 (87.17%), Postives = 202/226 (89.38%), Query Frame = 3 
Query:    6 GLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAFIAVRNPQTVPTATQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAY 683
            GLYDISGVEVGQHFYWQIGGFQVH QVLITSWVVIAILL SA IAVRNPQT+PT  QNFFEYVLEFIRDVSKTQIGEEY PWVPFIGT+FLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS+AYFYAGL+KKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAY
Sbjct:   13 GLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLSSAAIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYRPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLTKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAY 238
The following BLAST results are available for this feature:
BLAST of DR405783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
ATPI_PANGI3.743e-10986.73ATP synthase subunit a, chloroplastic OS=Panax gin... [more]
ATPI_BARVE3.743e-10987.17ATP synthase subunit a, chloroplastic OS=Barbarea ... [more]
ATPI_OLIPU4.888e-10986.73ATP synthase subunit a, chloroplastic OS=Olimarabi... [more]
ATPI_DRANE4.888e-10987.17ATP synthase subunit a, chloroplastic OS=Draba nem... [more]
ATPI_AETGR4.888e-10987.17ATP synthase subunit a, chloroplastic OS=Aethionem... [more]
ATPI_RANMC6.384e-10986.73ATP synthase subunit a, chloroplastic OS=Ranunculu... [more]
ATPI_LEPVR6.384e-10986.73ATP synthase subunit a, chloroplastic OS=Lepidium ... [more]
ATPI_CAPBU6.384e-10987.17ATP synthase subunit a, chloroplastic OS=Capsella ... [more]
ATPI_MORIN8.338e-10986.28ATP synthase subunit a, chloroplastic OS=Morus ind... [more]
ATPI_FAGEA8.338e-10987.17ATP synthase subunit a, chloroplastic OS=Fagopyrum... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247K04 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247K04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405783 ID=DR405783; Name=DR405783; organism=Citrus sinensis; type=EST; length=684bp
GGGGGGGGTTATACGATATATCCGGTGTGGAAGTAGGCCAACATTTCTAT
TGGCAAATAGGTGGGTTCCAGGTCCATGCCCAAGTACTTATTACTTCTTG
GGTTGTAATTGCTATCTTATTAGGTTCAGCCTTTATAGCCGTTCGGAATC
CACAAACCGTTCCGACTGCCACTCAAAATTTCTTCGAATATGTCCTTGAA
TTCATTCGAGACGTGAGCAAAACTCAGATTGGAGAAGAATATGGCCCATG
GGTTCCCTTTATTGGAACTCTGTTTCTTTTTATTTTTGTTTCTAATTGGT
CAGGTGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGGGAGTTA
GCCGCACCCACGAATGATATAAATACTACCGTTGCTTTAGCTTTGCTCAC
GTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAGGCTATT
TCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAACATTTTA
GAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGGGAATAT
ATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAG
TGGTTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGTATTCAA
GCTCTTATTTTTGCAACTTTAGCTGCGGCTTATA
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