DR405775

Overview
NameDR405775
Unique NameDR405775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_ZYGBA (Histone H3 OS=Zygosaccharomyces bailii GN=HHT1 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_YEAST (Histone H3 OS=Saccharomyces cerevisiae GN=HHT1 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_KLULA (Histone H3 OS=Kluyveromyces lactis GN=HHT1 PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_CRYNE (Histone H3 OS=Cryptococcus neoformans GN=HHT1 PE=3 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 108/138 (78.26%), Postives = 115/138 (83.33%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPA--TGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLATKAARK AP+  +GGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI PKD+QLARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKQAPSQVSGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEASEAYLVSLFEDTNLAAIHAKRVTIQPKDLQLARRLRGERS 138
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_CANGA (Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3_ASHGO (Histone H3 OS=Ashbya gossypii GN=HHT1 PE=3 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 1.184e-52
Identity = 106/136 (77.94%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHR++PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRF                  LFEDTNL AIHAKRVTI  KDI+LARR+RGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3L2_ARATH (Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 PE=2 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 1.310e-51
Identity = 108/137 (78.83%), Postives = 112/137 (81.75%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSA-PATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTARKSTGGK PRK+LATKAARK+  P  GGVK+ HRFRPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQDFK DLRF                 GLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H3L_CAIMO (Histone H3-like OS=Cairina moschata PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.710e-51
Identity = 107/136 (78.68%), Postives = 110/136 (80.88%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 480
            MARTKQTA KSTG KAPRKQLATKAA KSAPA GGVKKPH +RPGTVAL EI +YQKSTELLI KLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRV+IMPKDIQL RRIRGERA
Sbjct:    1 MARTKQTACKSTGRKAPRKQLATKAAHKSAPAMGGVKKPHCYRPGTVALHEIHRYQKSTELLICKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVSIMPKDIQLTRRIRGERA 136
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.917e-51
Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 477
            MARTKQTARKSTG KAPRKQLATKAARKSAP +GGVKKPH+FRPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K D+RF                 GLFEDTNLCAIHA+RVTIM KD+QLARRIRGER
Sbjct:    1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKNDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
[Close]
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: H33_TETTH (Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 6.499e-51
Identity = 102/135 (75.56%), Postives = 112/135 (82.96%), Query Frame = 1 
Query:   73 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 477
            MARTKQTARKSTG KAPRKQLATKAARKSAP +GGVKKPH+FRPGTVALREIRKYQK+T+LLIRKLPFQRLVR+IA + K+D+RF                 GLFEDTNLCAIHA+RVTIM KD+ LARRIRGER
Sbjct:    1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRGER 135
The following BLAST results are available for this feature:
BLAST of DR405775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3_ZYGBA1.184e-5277.94Histone H3 OS=Zygosaccharomyces bailii GN=HHT1 PE=... [more]
H3_YEAST1.184e-5277.94Histone H3 OS=Saccharomyces cerevisiae GN=HHT1 PE=... [more]
H3_KLULA1.184e-5277.94Histone H3 OS=Kluyveromyces lactis GN=HHT1 PE=3 SV... [more]
H3_CRYNE1.184e-5278.26Histone H3 OS=Cryptococcus neoformans GN=HHT1 PE=3... [more]
H3_CANGA1.184e-5277.94Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2[more]
H3_ASHGO1.184e-5277.94Histone H3 OS=Ashbya gossypii GN=HHT1 PE=3 SV=3[more]
H3L2_ARATH1.310e-5178.83Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 ... [more]
H3L_CAIMO1.710e-5178.68Histone H3-like OS=Cairina moschata PE=3 SV=2[more]
H33_TETPY2.917e-5176.30Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2[more]
H33_TETTH6.499e-5175.56Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247J17 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247J17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405775 ID=DR405775; Name=DR405775; organism=Citrus sinensis; type=EST; length=705bp
GGGGGATCTTTCAATTTTCATTCATATTTTAAGATCTCCCAAGAAAAAAG
AAACACTTAATTTCCCAAATCAATGGCCCGCACGAAGCAAACCGCTCGCA
AGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCAAGGCGGCA
AGGAAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCACAGGTTCCG
TCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACTG
AGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGGAAATCGCT
CAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTTGCTGCACT
TCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGACACCAACC
TCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGGACATTCAG
CTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGGAACTTTCTGATTTAAT
GTATTTTGTTCCTCTTACTTCGATGTTAGTCTTTTGGTCAATATTTGGGG
TTTAGATTTATTGTTTGGATGTCTATCCGATGGATTAGATCGGNNNTAGT
ATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAATCTAATA
GATAATTAGCCTTTTAATATTTTTTTGAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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