DR405775

Overview
NameDR405775
Unique NameDR405775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22
Identity = 67/144 (46.53%), Postives = 81/144 (56.25%), Query Frame = 1
Query:   64 PKSMARTKQTARKSTGG--KAPRKQLATKAARKSAPAT---GGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 471
            P S A  +Q  R   G   +AP         +   P T          R+RPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++      +R+                  L EDTNLCAIHAKRVTIM KDIQLARRIRG
Sbjct:   13 PTSSALRRQRERDDGGRSTRAPGHNTGLYGNQPGDPPTIRSTNTTVKRRYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_ASHGO (Histone H3-like centromeric protein CSE4 OS=Ashbya gossypii GN=CSE4 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21
Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  181 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            KKP R+RP  VAL+EIR+YQ+STELLI ++PF RLV+E+   F T    +R+                 GL E TNL A+HAKRVT+M KD+QLARRIRG+
Sbjct:  102 KKPQRYRPSDVALQEIRRYQRSTELLISRMPFARLVKEVTDQFTTVDQQMRWQSMAILALQEASEAYIVGLLEHTNLLALHAKRVTVMRKDMQLARRIRGQ 202          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 59/125 (47.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  109 GGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT----DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 471
            GG  P  Q       +    T  + KP R++PG  AL+EIR+YQ+ TELLI KLPF R+VRE+A ++      +L++                  LFED NLCAIHAKRVTIM KD+QLARRIRG
Sbjct:   21 GGLHPLGQTRKTLPGERRDTTQKITKP-RYKPGQKALKEIRRYQRGTELLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_XENTR (Histone H3-like centromeric protein A OS=Xenopus tropicalis GN=cenpa PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 61/130 (46.92%), Postives = 74/130 (56.92%), Query Frame = 1
Query:   91 TARKSTGG-KAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--XXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 471
            T+ +S G   AP ++ A +A  K            RFRPGT AL EIRKYQKSTELLIRK PF RLVRE+   +   L +                    LFED+ LC++HAKRVT+  +DIQLARRIRG
Sbjct:   26 TSTRSPGRPSAPEQRKAPRATPKK-----------RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_XENLA (Histone H3-like centromeric protein A OS=Xenopus laevis GN=cenpa PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.012e-19
Identity = 60/124 (48.39%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  106 TGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF--XXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 471
            T  + P  Q   +A+R S       KK  RFRPGT AL EIRKYQKSTELLIRK PF RLVRE+   +   + +                    LFED+ LC++HAKRVT+  +DIQLARRIRG
Sbjct:   29 TSPRRPHAQQQRRASRASP------KK--RFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGMNYNWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRG 144          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  193 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            ++ P  +AL EIRKYQ+ST+LLI K+PF RLV+E+  +F T   DLR+                 GL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:  131 KYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_KLULA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces lactis GN=CSE4 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  193 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            R++P  +AL EIRKYQ+ST+LLI ++PF RLV+E+   F T+   LR+                 GL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:   86 RYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 182          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_KLUMA (Histone H3-like centromeric protein CSE4 OS=Kluyveromyces marxianus GN=CSE4 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  193 RFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD---LRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            +++P  +AL EIRKYQ+ST+LLI ++PF RLV+E+   F +D   LR+                 GL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:   94 KYKPSDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFASDEEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIRGQ 190          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_CANGA (Histone H3-like centromeric protein CSE4 OS=Candida glabrata GN=CSE4 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
Query:  181 KKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            K+   F P  +A+ EI KYQ+ST LLI+K+PF +LV+E+ ++F     DLR+                 GL E TNL A+HAKR+TIM KD+QLARRIRG+
Sbjct:  138 KEKRNFAPSKLAMYEIEKYQRSTALLIQKIPFAKLVKEVTEEFAGESQDLRWQSMAILALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 238          
BLAST of DR405775 vs. ExPASy Swiss-Prot
Match: CENPA_SACSE (Histone H3-like centromeric protein CSE4 OS=Saccharomyces servazzii GN=CSE4 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 56/141 (39.72%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   61 FPKSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 474
            + +S  RT     KS+     R++      RK        K   R+RP  +AL EIRKYQ+ST+LLI K+PF RLV+E+  +F      L++                 GL E  NL A+HAKR+T+M KD+QLARRIRG+
Sbjct:  152 YRESPRRTTDKILKSSSKNYRRRENLGGEIRKIRQEKAN-KTATRYRPSDLALYEIRKYQQSTDLLISKIPFARLVKEVTDNFILENQHLQWHSMAILALQEASEAYLVGLLEHANLLALHAKRITLMKKDVQLARRIRGQ 291          
The following BLAST results are available for this feature:
BLAST of DR405775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
CENPA_PICFA1.668e-2246.53Histone H3-like centromeric protein CSE4 OS=Pichia... [more]
CENPA_ASHGO3.146e-2152.48Histone H3-like centromeric protein CSE4 OS=Ashbya... [more]
CENPA_YARLI2.039e-2047.20Histone H3-like centromeric protein CSE4 OS=Yarrow... [more]
CENPA_XENTR1.012e-1946.92Histone H3-like centromeric protein A OS=Xenopus t... [more]
CENPA_XENLA1.012e-1948.39Histone H3-like centromeric protein A OS=Xenopus l... [more]
CENPA_YEAST3.846e-1951.55Histone H3-like centromeric protein CSE4 OS=Saccha... [more]
CENPA_KLULA1.461e-1850.52Histone H3-like centromeric protein CSE4 OS=Kluyve... [more]
CENPA_KLUMA1.909e-1849.48Histone H3-like centromeric protein CSE4 OS=Kluyve... [more]
CENPA_CANGA3.256e-1847.52Histone H3-like centromeric protein CSE4 OS=Candid... [more]
CENPA_SACSE5.553e-1839.72Histone H3-like centromeric protein CSE4 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionCSAI-PNP1247J17 Developing fruit 24 DAFB Citrus sinensis cDNA clone CSAI-PNP1247J17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405775 ID=DR405775; Name=DR405775; organism=Citrus sinensis; type=EST; length=705bp
GGGGGATCTTTCAATTTTCATTCATATTTTAAGATCTCCCAAGAAAAAAG
AAACACTTAATTTCCCAAATCAATGGCCCGCACGAAGCAAACCGCTCGCA
AGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCAAGGCGGCA
AGGAAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCACAGGTTCCG
TCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACTG
AGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGGAAATCGCT
CAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTTGCTGCACT
TCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGACACCAACC
TCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGGACATTCAG
CTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGGAACTTTCTGATTTAAT
GTATTTTGTTCCTCTTACTTCGATGTTAGTCTTTTGGTCAATATTTGGGG
TTTAGATTTATTGTTTGGATGTCTATCCGATGGATTAGATCGGNNNTAGT
ATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAATCTAATA
GATAATTAGCCTTTTAATATTTTTTTGAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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