DR405728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.415e-49 Identity = 103/182 (56.59%), Postives = 131/182 (71.98%), Query Frame = 3 Query: 228 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 M + TD +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG WGEHE+DY+L + ++V++NP+P+E+ Y YV++E+L Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPDPNEIKSYCYVSKEEL 179
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 2.043e-48 Identity = 95/175 (54.29%), Postives = 130/175 (74.29%), Query Frame = 3 Query: 249 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 + +D Q +L+ E CIL+DEND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+L Sbjct: 7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPDPNEIKSYCYVSKEEL 179
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.551e-48 Identity = 95/173 (54.91%), Postives = 129/173 (74.57%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L ELGI E+V ++E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E++ Sbjct: 9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPDPNEIKSYCYVSKEEV 179
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.551e-48 Identity = 96/173 (55.49%), Postives = 128/173 (73.99%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V +E L RI YKA SDG WGEHE+DY+LF+ ++V++NP+P+E+ Y YV++E+L Sbjct: 9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVTLNPDPNEIKSYCYVSKEEL 179
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.207e-44 Identity = 96/175 (54.86%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 D Q RLM E+ CI+VDEND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQRKL ELGI A+ +P D+F L RI Y APS G WGEHE+DY+LF V ++ NP+EV YKYV E+L Sbjct: 11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILFFKGKVELDINPNEVQAYKYVTMEEL 183
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.282e-42 Identity = 93/174 (53.45%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 D Q RLM E+ CILV+ +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y APSDG WGEHE+DY+LF NP+EV++ +YV + +L Sbjct: 23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGNPNEVSDTRYVTKPEL 195
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.731e-42 Identity = 89/179 (49.72%), Postives = 124/179 (69.27%), Query Frame = 3 Query: 243 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 +D +D V RR + E+ I+VDEND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ + +KA SD WGEHE+ YLL + ++V++NP+P E Y+++E+L Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPDPSETKSILYLSQEEL 179
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.568e-40 Identity = 89/178 (50.00%), Postives = 129/178 (72.47%), Query Frame = 3 Query: 252 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS--DGKWGEHELDYLLFIVRD-VSVNPNPDEVAEYKYVNREQL 773 G + +Q LM ++ECI+VD +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL ELG+ + V +D+FT + +I YK+ S D +WGEHE+D++L + +D +++N P+EV +YKYV++E+L Sbjct: 15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKDGITINAEPNEVMDYKYVSQEEL 190
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.614e-37 Identity = 90/188 (47.87%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 240 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKWGEHELDYLLF----IVRDVSVNPNPDEVAEYKYVNREQL 773 T +G D Q +LM E+ CI++D +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL +++ G AA RKL ELGI ++ +F L RI Y APS+ WGEHE+DY+LF +++VNPN +EV ++K+V+ L Sbjct: 57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILFYKINAKENLTVNPNVNEVRDFKWVSPNDL 242
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_ERWCT (Isopentenyl-diphosphate Delta-isomerase OS=Erwinia carotovora subsp. atroseptica GN=idi PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20 Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 291 ECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGI-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 E +LVDEND+ G K H+ + LHRA +V++FNS+ +LLLQQR+ K +W+NTCCSHP E L AA R+L +E+G+ CA TP+ + Y+ D EHEL ++ F V D NPDEV+ Y+Y + +++ Sbjct: 5 EVVLVDENDKPTGVMEKQEAHVKGE------LHRAITVYIFNSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGEETL---------QAAHRRLYEEMGLRCA-------LTPMFTLTYRLQLDNGLIEHELGHVYFGVTDDVPQINPDEVSSYEYQSIDEI 144 The following BLAST results are available for this feature:
BLAST of DR405728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405728 ID=DR405728; Name=DR405728; organism=Citrus sinensis; type=EST; length=775bpback to top |