DR405728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19 Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 ++ ILVD +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+G AE V FT Y+A G EHE D++ + D P+E + + + +QL Sbjct: 2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHIYVGLFDGKPQGAPEEAHSWSWTDIQQL 143
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_AZOSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Azoarcus sp. (strain EbN1) GN=idi1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19 Identity = 61/160 (38.12%), Postives = 84/160 (52.50%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGI-CAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVN 761 ED+ ILVDEND +G E K H LHRA S+F+F+S LLLQ+R+ +K +W+NTCCSHP RE AA+R+L +E+GI C DV +Y+A E+E D++ F D PNPDE ++K+V+ Sbjct: 2 EDQVILVDENDTEIGVEGKMIAHRSGS------LHRAISIFIFDSADRLLLQKRAASKYHSAGLWSNTCCSHPRPREE---------CARAARRRLREEMGIACELDVKFG-------FVYRAVLTNHLIENEFDHVFFGRHDGDPVPNPDEAEDWKWVD 139
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_NOCFA (Isopentenyl-diphosphate Delta-isomerase OS=Nocardia farcinica GN=idi PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.908e-18 Identity = 62/155 (40.00%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWG--EHELDYLLFIVRDVSVNPNPDEVAEYKYV 758 LVDE R VG C + E LHRAFSV LF++ +LLQQR+ K FPL+W NTCC HP ES V AA +L +ELG+ A T +G Y+A +D G EHE D++L D + +P+P EVA ++V Sbjct: 5 LVDEAGRAVGA-----CPVAEAHRDPGKLHRAFSVLLFDTAGRVLLQQRAAVKTRFPLLWANTCCGHPAPGES---------VEAAAATRLAEELGVAA------GLTEVGVFRYRA-ADTATGRVEHEWDHVLIGTLDTTPHPDPAEVANLRWV 138
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI2_AZOSE (Isopentenyl-diphosphate Delta-isomerase 2 OS=Azoarcus sp. (strain EbN1) GN=idi2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.062e-16 Identity = 56/163 (34.36%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 ED+ ILVDE+D VG K H LHRA S+F+F+S L+LQ+R+ K +W+NTCCSHP E +AA+R+L +E+G+ E F +Y+ EHE D++ F D NPDE ++K+V+ +L Sbjct: 2 EDQVILVDEHDNKVGFAGKMAAH------QRGALHRAISIFVFDSHSRLMLQRRAAGKYHSGGLWSNTCCSHPRPNEES---------ADAARRRLREEMGVDCELKKAFSF------VYRTKFGSGLIEHEFDHVFFGNHDGRPVLNPDEADDWKWVDLTEL 143
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI1_PHOLL (Isopentenyl-diphosphate Delta-isomerase 1 OS=Photorhabdus luminescens subsp. laumondii GN=idi1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.517e-16 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVN 761 + +LVDEND VG NK + HL + + LHRAFS F+ NSK E+ +QQR+ +K+ +P W+N+ CSHP E + +A R+ +ELGI + P +F L + YK EHEL ++ + D NP EV+ ++N Sbjct: 2 ENVVLVDENDNRVGCINKIDAHL-----NGDHLHRAFSCFIINSKNEVYIQQRAQSKLLWPGYWSNSYCSHPRPDEE---------ISHAVMRRAEEELGIVINEEP--KF--LYKFQYKEKYKDVGYEHELCHVFVVFTDTPPTENPKEVSAGFFIN 141
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_BURM1 (Isopentenyl-diphosphate Delta-isomerase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=idi PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVN 761 E+ ILVD +DR +G K H LLHRAFS+F+F+S LLLQQR+ K +W+NTCC HP RE+ + +A +R+L +E+G E PVD ++Y+A + EHE ++ D +V P+ EVA +++++ Sbjct: 2 EERLILVDTDDRPIGICEKMRAH------HEGLLHRAFSIFVFDSAGRLLLQQRALNKYHSGGLWSNTCCGHPRPREA---------LPDAVRRRLGEEMGFACELRPVD------ALVYRARFENDLIEHEFVHIHVGRFDGTVAPDFAEVAAWRWID 139
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI2_PHOLL (Isopentenyl-diphosphate Delta-isomerase 2 OS=Photorhabdus luminescens subsp. laumondii GN=idi2 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVN 761 +LVD++D +G K + H +LHRAFS+F+F++K LLLQ+R+ TK +WTN+CC HP R E +E AA R+L +E+G D P+ + + +Y A E+E D++ D N DEV++YK+VN Sbjct: 6 VLVDKHDNPIGSAGKADIH------QKGMLHRAFSIFVFDNKGNLLLQKRAATKYHSAGLWTNSCCGHP--RVGEALEA-------AAHRRLGEEMGF---DCPLKK---VSSFIYHAILPNNLIEYEYDHVFIGRFDKEPIINLDEVSDYKWVN 139
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_PHOPR (Isopentenyl-diphosphate Delta-isomerase OS=Photobacterium profundum GN=idi PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.888e-15 Identity = 54/170 (31.76%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 276 LMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSK---YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKYVNREQL 773 ++ E++ +LVD+ R +G + K H LH AFSV L+ E L+QQR+ K +WTNTCCSHP R+ E +E+ A R+L +E+GI V ++ + +Y+A D + EHE D++L ++++ PN +EV Y++ ++ L Sbjct: 1 MIIEEQVVLVDQQGRALGLQEKMQAHRD------GALHLAFSVLLYRETTQGIEFLMQQRALGKYHSGGLWTNTCCSHP--RQGETLEQ-------AGLRRLTEEMGI----VGLESLDDIASFVYRAELDNQLIEHEWDHVLIANGTELAIIPNSEEVKSYRWWSKADL 151
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_VIBFM (Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain MJ11) GN=idi PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14 Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSK---YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKY 755 +LV+E +G K H EK LLH AFSV L+ E LLQ+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++F LG +Y+A + EHE DY+L DVS NP+EV++ ++ Sbjct: 6 VLVNEQGDAIGTMEKLEAH--EK----GLLHLAFSVLLYRETDLGKEFLLQKRAECKYHSKNKWSNTCCSHPRVNEN---------VEAAGTRRLNEEIGITG--VLPEQFVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQW 145
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_VIBF1 (Isopentenyl-diphosphate Delta-isomerase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=idi PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 57/157 (36.31%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSK---YELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFI-VRDVSVNPNPDEVAEYKY 755 +LV+E +G K H EK LLH AFSV L+ E LLQ+R+ K W+NTCCSHP E+ V A R+L +E+GI V ++F LG +Y+A + EHE DY+L DVS NP+EV++ ++ Sbjct: 6 VLVNEQGDAIGTMEKLEAH--EK----GLLHLAFSVLLYRETDLGKEFLLQKRAECKYHSKNKWSNTCCSHPRVNEN---------VEVAGTRRLNEEIGITG--VLPEQFVNLGWFIYQAELENGLSEHEQDYILIANTPDVSFILNPEEVSDIQW 145 The following BLAST results are available for this feature:
BLAST of DR405728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405728 ID=DR405728; Name=DR405728; organism=Citrus sinensis; type=EST; length=775bpback to top |