DR405728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_STRCO (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces coelicolor GN=idi PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.251e-13 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 LVDEN +G K + H + LHRAFSVFLF+ + LL+QQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P E E ++L + + P+P+EVA +V+ +L Sbjct: 24 LVDENGVTIGTAEKLSAH-----QPPGRLHRAFSVFLFDERGRLLIQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTFEELG-----VSPSLLAEAGTVRYNHPDPASGLVEQEYNHLFVGLVQAELRPDPEEVAGTAFVSPAEL 163
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_STRGG (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=idi PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13 Identity = 53/159 (33.33%), Postives = 74/159 (46.54%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGK-WGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 LVDEN +G K H ++ LHRAFSVFLF+ + LLLQ+R+ K P VW+NTCC HP E+ AA R+ +ELG+ G + Y P E E ++L + + P+P+EV E +V +L Sbjct: 24 LVDENGTTIGTAEKLAAH-----QAPGQLHRAFSVFLFDEQGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELGLSP-----SLLAEAGTVRYNHPDPASGLVEQEFNHLFVGLAQTAPKPDPEEVGETAFVTAAEL 163
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_SACEN (Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=idi PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.059e-12 Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVA 743 ++ +L++++ + +G +K H ++ LH AFS ++FN + +LLL QR+ K T+P VWTNTCC HP +E+ + A R+L +ELG+ D+ + L R Y+A E+E+ + D PN +EVA Sbjct: 2 EQVVLLNDSGQAIGVTDKATVHHLD-----TPLHLAFSCYVFNGRGQLLLTQRAHEKRTWPGVWTNTCCGHPAPQEA---------MPEAITRRLGEELGLTVRDLTL----VLPRFRYRAVMGNGVVENEICPVFAAFTDDEPAPNREEVA 135
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_STRAW (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces avermitilis GN=idi PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS-DGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 LVDEN +G K H + LHRAFSVFLF+ + LLLQQR+ K P VW+NTCC HP E+ AA R+ +ELG V G + Y P D E E ++L + + P+ +E+ + +V +L Sbjct: 24 LVDENGTTIGTAEKLAAH-----QPPGQLHRAFSVFLFDEQGRLLLQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTHEELG-----VSPSLLAEAGTVRYNHPDPDSGLVEQEFNHLFVGLVQSPLRPDAEEIGDTAFVTAAEL 163
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_HALHL (Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=idi PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12 Identity = 54/150 (36.00%), Postives = 72/150 (48.00%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYL-LFIVRDVSVNPNPD 734 + ++VD + VG E K H LH AF VF+FN + ELLLQ+R+ +K F +W+NTCC HP E GV AA+R+L +E G PV +FT Y A D G E +Y + I R + P PD Sbjct: 2 EHVVIVDPEGQRVGTEEKIRAHA-----DGGTLHLAFCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHPRPGE---------GVTEAAERRLGEEFGFVTRLHPVAQFT------YHA-EDHHTGLAEYEYAHVLIGRAPTDQPAPD 130
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_CLAMS (Isopentenyl-diphosphate Delta-isomerase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=idi PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12 Identity = 49/159 (30.82%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 +L+D++ +G K H + LH AFS +F+++ +L+ +R+ K+T+P VWTN+ C HP E L A R+ ELG+ E V + L Y+A E+E+ + V V+P P+EV EY++V+ EQL Sbjct: 9 VLLDDDGETIGTAPKATVHTRD-----TALHLAFSCHVFDAEGRILVTRRAIGKLTWPGVWTNSFCGHPAPDEDML---------EAVHRRAEQELGLTLESVEL----VLPDFRYRATDAAGVVENEICPVFRAVAATPVDPRPEEVGEYQWVDPEQL 149
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_CLAM3 (Isopentenyl-diphosphate Delta-isomerase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=idi PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.864e-12 Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQL 773 +L+D++ +G K H + LH AFS +F+++ +L+ +R+ K+T+P VWTN+ C HP E +R A R+ ELG+ E V + L Y+A E+E+ + V V+P P+EV EY++V+ EQL Sbjct: 9 VLLDDDGETIGTAPKATVHTRD-----TALHLAFSCHVFDAQGRILVTRRAIGKLTWPGVWTNSFCGHPAPDED---------MREAVHRRAEQELGLELESVEL----VLPDFRYRATDAAGVVENEICPVFRAVAASPVDPRPEEVGEYQWVDPEQL 149
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_KLEP7 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=idi PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 279 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDV-PVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYKYVN 761 M + IL+DE D+ G KY H + LH AFS +LFN + +LL+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ D+ PV P R Y+A + E+E+ ++ R VS V PN DEV +Y++V+ Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTFD-----TPLHLAFSCWLFNQQGQLLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGVEISDIAPVH---PAFR--YRAVAPNGIVENEV-CPVYAARVVSEVQPNDDEVMDYQWVD 143
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_KLEP3 (Isopentenyl-diphosphate Delta-isomerase OS=Klebsiella pneumoniae (strain 342) GN=idi PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 279 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVS-VNPNPDEVAEYKYVNREQL 773 M + IL+DE D+ G KY H ++ LH AFS +LFN + + L+ +RS K +P VWTN+ C HP ++ E E+ A R+ ELG+ E + P R Y+A + E+E+ ++ R VS V PN DEV +Y++V+ E + Sbjct: 1 MAGEHVILLDEQDQPAGMLEKYAAHTLD-----TPLHLAFSCWLFNQQGQFLVTRRSLGKKAWPGVWTNSVCGHP--QQGETFEQ-------AVTRRCRFELGV--EIADIAPIHPAFR--YRAVAPNGIVENEV-CPVYAARVVSQVQPNDDEVMDYQWVDLETM 147
BLAST of DR405728 vs. ExPASy Swiss-Prot
Match: IDI_MYCTU (Isopentenyl-diphosphate Delta-isomerase OS=Mycobacterium tuberculosis GN=idi PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 50/161 (31.06%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVSVNPNPDEVAEYKYVNREQ 770 + +L+++ G +K H + LH AFS ++F+ +LL+ +R+ TK T+P VWTN+CC HPL ES + A +R+L ELG+ + VD P R Y+A E+E+ + + D PN DEV ++++ EQ Sbjct: 12 ERVVLLNDRGDATGVADKATVHTGD-----TPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVWTNSCCGHPLPGES---------LPGAIRRRLAAELGLTPD--RVDLILPGFR--YRAAMADGTVENEICPVYRVQVDQQPRPNSDEVDAIRWLSWEQ 154 The following BLAST results are available for this feature:
BLAST of DR405728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405728 ID=DR405728; Name=DR405728; organism=Citrus sinensis; type=EST; length=775bpback to top |