DR405720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.086e-27 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 3 Query: 243 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALG 545 +D +D V RR + E+ I+VDEND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+G Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIG 103 HSP 2 Score: 33.113 bits (74), Expect = 2.086e-27 Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 1 Query: 523 LLRRTLLGVRNAAQRKLXXELGICAEDVPVDEFTPLGRILYKAPSD 660 L + +GVR AAQR+L ELGI E + ++ + +KA SD Sbjct: 96 LEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSD 141
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26 Identity = 75/159 (47.17%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 228 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGGEECCTKKAFXXAGHLC*RC--AXXXXXXXXXXXXQGPF*WQSGGEHELDYLL 698 M + +TD +D Q +LM E CILVDENDR +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL SEL E +A+G ++ G Q W GEHE+DY+L Sbjct: 1 MPEVSTD-DLDERQVQLMAE-MCILVDENDRRIGAETKKNCHLNENIER-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYKAQSDSIW---GEHEIDYIL 153
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGGEECCTKK 569 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+G + ++ Sbjct: 9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRR 111
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGGEECCTKK 569 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+G + ++ Sbjct: 9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRR 111
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 249 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGGEECCTKK 569 + +D Q +L+ E CIL+DEND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+G + ++ Sbjct: 7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRR 111
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 240 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL 524 T +G D Q +LM E+ CI++D +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL Sbjct: 57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDEL 149
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21 Identity = 63/150 (42.00%), Postives = 80/150 (53.33%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGGEECCTKKAFXXAGHLC*RCAXXXXXXXXXXXXQGPF*WQSGGEHELDYLL 698 D Q RLM E+ CI+VDEND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E G + +K F G P + GEHE+DY+L Sbjct: 11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPS-TGAWGEHEIDYIL 157
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 65/151 (43.05%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGGEECCTKKAFXXAGHLC*RCAXXXXXXXXXXXXQGPF*WQSG--GEHELDYLL 698 D Q RLM E+ CILV+ +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +G ++K G P G GEHE+DY+L Sbjct: 23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAP---SDGLWGEHEIDYIL 169
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 252 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGGEECCTKK 569 G + +Q LM ++ECI+VD +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA G + +K Sbjct: 15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRK 119
BLAST of DR405720 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.605e-13 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL 524 ++ ILVD +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L Sbjct: 2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTL 75 HSP 2 Score: 24.2534 bits (51), Expect = 8.605e-13 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 556 AAQRKLXXELGICAEDVPVDEFT 624 AAQR+L E+G AE V FT Sbjct: 77 AAQRRLQEEMGFSAELQQVSSFT 99 The following BLAST results are available for this feature:
BLAST of DR405720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405720 ID=DR405720; Name=DR405720; organism=Citrus sinensis; type=EST; length=706bpback to top |