DR405658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 2.085e-42 Identity = 86/148 (58.11%), Postives = 101/148 (68.24%), Query Frame = 3 Query: 228 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 M + TD +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L ELGI E+VP +E L RI YKA SDG G Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWG 145 HSP 2 Score: 42.743 bits (99), Expect = 2.085e-42 Identity = 15/32 (46.88%), Postives = 26/32 (81.25%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNR 765 GEHE+DY+L ++V++NP+P+E+ Y YV++ Sbjct: 145 GEHEIDYILLVRKNVTLNPDPNEIKSYCYVSK 176
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.733e-41 Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L ELGI E+V ++E L RI YKA SDG G Sbjct: 9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWG 145 HSP 2 Score: 45.0542 bits (105), Expect = 1.733e-41 Identity = 17/35 (48.57%), Postives = 28/35 (80.00%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNRGTV 774 GEHE+DY+LF ++V++NP+P+E+ Y YV++ V Sbjct: 145 GEHEVDYILFLRKNVTLNPDPNEIKSYCYVSKEEV 179
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.258e-41 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 3 Query: 249 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 + +D Q +L+ E CIL+DEND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V ++E L RI YKA SDG G Sbjct: 7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWG 145 HSP 2 Score: 45.0542 bits (105), Expect = 2.258e-41 Identity = 16/32 (50.00%), Postives = 27/32 (84.38%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNR 765 GEHE+DY+LF ++V++NP+P+E+ Y YV++ Sbjct: 145 GEHEIDYILFLRKNVTLNPDPNEIKSYCYVSK 176
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.510e-41 Identity = 78/139 (56.12%), Postives = 97/139 (69.78%), Query Frame = 3 Query: 255 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI E+V +E L RI YKA SDG G Sbjct: 9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWG 145 HSP 2 Score: 45.0542 bits (105), Expect = 6.510e-41 Identity = 16/32 (50.00%), Postives = 27/32 (84.38%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNR 765 GEHE+DY+LF ++V++NP+P+E+ Y YV++ Sbjct: 145 GEHEIDYILFLKKNVTLNPDPNEIKSYCYVSK 176
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.966e-36 Identity = 78/140 (55.71%), Postives = 92/140 (65.71%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 D Q RLM E+ CILV+ +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y APSDG G Sbjct: 23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWG 161 HSP 2 Score: 35.8094 bits (81), Expect = 1.966e-36 Identity = 14/32 (43.75%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNR 765 GEHE+DY+LF NP+EV++ +YV + Sbjct: 161 GEHEIDYILFSTTPTEHTGNPNEVSDTRYVTK 192
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.700e-35 Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 243 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSD 659 +D +D V RR + E+ I+VDEND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ + +KA SD Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSD 141 HSP 2 Score: 34.2686 bits (77), Expect = 4.700e-35 Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 670 GEHELDYLLFXXRDVSVNPNPDEVAEYKYVNR 765 GEHE+ YLL ++V++NP+P E Y+++ Sbjct: 145 GEHEICYLLLVRKNVTLNPDPSETKSILYLSQ 176
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.600e-34 Identity = 70/136 (51.47%), Postives = 96/136 (70.59%), Query Frame = 3 Query: 252 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPS 656 G + +Q LM ++ECI+VD +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL ELG+ + V +D+FT + +I YK+ S Sbjct: 15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSES 148 HSP 2 Score: 38.891 bits (89), Expect = 6.600e-34 Identity = 15/33 (45.45%), Postives = 26/33 (78.79%), Query Frame = 1 Query: 670 GEHELDYLLFXXRD-VSVNPNPDEVAEYKYVNR 765 GEHE+D++L +D +++N P+EV +YKYV++ Sbjct: 155 GEHEIDHILIMQKDGITINAEPNEVMDYKYVSQ 187
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.285e-31 Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = 3 Query: 258 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKAPSDGKXG 671 D Q RLM E+ CI+VDEND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQRKL ELGI A+ +P D+F L RI Y APS G G Sbjct: 11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWG 149
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.298e-26 Identity = 73/150 (48.67%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 240 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICAEDVPV-DEFTPLGRILYKAPSDGKXG 671 T +G D Q +LM E+ CI++D +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL +++ G AA RKL ELGI ++ +F L RI Y APS+ G Sbjct: 57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWG 204
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_ERWCT (Isopentenyl-diphosphate Delta-isomerase OS=Erwinia carotovora subsp. atroseptica GN=idi PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.781e-16 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 291 ECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGI-CAEDVPVDEFTPLGRILYKAPSD 659 E +LVDEND+ G K H+ + LHRA +V++FNS+ +LLLQQR+ K +W+NTCCSHP E L AA R+L +E+G+ CA TP+ + Y+ D Sbjct: 5 EVVLVDENDKPTGVMEKQEAHVKGE------LHRAITVYIFNSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGEETL---------QAAHRRLYEEMGLRCA-------LTPMFTLTYRLQLD 106 HSP 2 Score: 30.0314 bits (66), Expect = 2.781e-16 Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKY 756 EHEL ++ F D NPDEV+ Y+Y Sbjct: 111 EHELGHVYFGVTDDVPQINPDEVSSYEY 138 The following BLAST results are available for this feature:
BLAST of DR405658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405658 ID=DR405658; Name=DR405658; organism=Citrus sinensis; type=EST; length=776bpback to top |