DR405658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_NOCFA (Isopentenyl-diphosphate Delta-isomerase OS=Nocardia farcinica GN=idi PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.034e-15 Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICA 596 LVDE R VG C + E LHRAFSV LF++ +LLQQR+ K FPL+W NTCC HP ES V AA +L +ELG+ A Sbjct: 5 LVDEAGRAVGA-----CPVAEAHRDPGKLHRAFSVLLFDTAGRVLLQQRAAVKTRFPLLWANTCCGHPAPGES---------VEAAAATRLAEELGVAA 89 HSP 2 Score: 29.6462 bits (65), Expect = 1.034e-15 Identity = 13/34 (38.24%), Postives = 20/34 (58.82%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKYVNRGTV 774 EHE D++L D + +P+P EVA ++V V Sbjct: 110 EHEWDHVLIGTLDTTPHPDPAEVANLRWVRPAEV 143
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.296e-15 Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRI-----------LYKAPSDGKXGGA 677 ++ ILVD +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+G AE V FT + +Y DGK GA Sbjct: 2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFTYQAAVPGDLIEHEFDHIYVGLFDGKPQGA 128
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI2_AZOSE (Isopentenyl-diphosphate Delta-isomerase 2 OS=Azoarcus sp. (strain EbN1) GN=idi2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.089e-14 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 599 ED+ ILVDE+D VG K H LHRA S+F+F+S L+LQ+R+ K +W+NTCCSHP E +AA+R+L +E+G+ E Sbjct: 2 EDQVILVDEHDNKVGFAGKMAAH------QRGALHRAISIFVFDSHSRLMLQRRAAGKYHSGGLWSNTCCSHPRPNEES---------ADAARRRLREEMGVDCE 91 HSP 2 Score: 28.8758 bits (63), Expect = 1.089e-14 Identity = 12/30 (40.00%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKYVN 762 EHE D++ F D NPDE ++K+V+ Sbjct: 110 EHEFDHVFFGNHDGRPVLNPDEADDWKWVD 139
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_AZOSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Azoarcus sp. (strain EbN1) GN=idi1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14 Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAE 599 ED+ ILVDEND +G E K H LHRA S+F+F+S LLLQ+R+ +K +W+NTCCSHP RE AA+R+L +E+GI E Sbjct: 2 EDQVILVDENDTEIGVEGKMIAHRSGS------LHRAISIFIFDSADRLLLQKRAASKYHSAGLWSNTCCSHPRPREE---------CARAARRRLREEMGIACE 91
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI1_PHOLL (Isopentenyl-diphosphate Delta-isomerase 1 OS=Photorhabdus luminescens subsp. laumondii GN=idi1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.530e-13 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVP 608 + +LVDEND VG NK + HL + + LHRAFS F+ NSK E+ +QQR+ +K+ +P W+N+ CSHP E + +A R+ +ELGI + P Sbjct: 2 ENVVLVDENDNRVGCINKIDAHL-----NGDHLHRAFSCFIINSKNEVYIQQRAQSKLLWPGYWSNSYCSHPRPDEE---------ISHAVMRRAEEELGIVINEEP 94 HSP 2 Score: 22.7126 bits (47), Expect = 2.530e-13 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKYVN 762 EHEL ++ D NP EV+ ++N Sbjct: 112 EHELCHVFVVFTDTPPTENPKEVSAGFFIN 141
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI2_PHOLL (Isopentenyl-diphosphate Delta-isomerase 2 OS=Photorhabdus luminescens subsp. laumondii GN=idi2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.530e-13 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 297 ILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELG 587 +LVD++D +G K + H +LHRAFS+F+F++K LLLQ+R+ TK +WTN+CC HP R E +E AA R+L +E+G Sbjct: 6 VLVDKHDNPIGSAGKADIH------QKGMLHRAFSIFVFDNKGNLLLQKRAATKYHSAGLWTNSCCGHP--RVGEALEA-------AAHRRLGEEMG 87 HSP 2 Score: 26.5646 bits (57), Expect = 2.530e-13 Identity = 14/43 (32.56%), Postives = 23/43 (53.49%), Query Frame = 1 Query: 634 AFCTRPLLMASXGEHELDYLLFXXRDVSVNPNPDEVAEYKYVN 762 +F +L + E+E D++ D N DEV++YK+VN Sbjct: 97 SFIYHAILPNNLIEYEYDHVFIGRFDKEPIINLDEVSDYKWVN 139
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_BURM1 (Isopentenyl-diphosphate Delta-isomerase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=idi PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.547e-13 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 285 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVD 614 E+ ILVD +DR +G K H LLHRAFS+F+F+S LLLQQR+ K +W+NTCC HP RE+ + +A +R+L +E+G E PVD Sbjct: 2 EERLILVDTDDRPIGICEKMRAH------HEGLLHRAFSIFVFDSAGRLLLQQRALNKYHSGGLWSNTCCGHPRPREA---------LPDAVRRRLGEEMGFACELRPVD 96 HSP 2 Score: 20.4014 bits (41), Expect = 5.547e-13 Identity = 10/34 (29.41%), Postives = 20/34 (58.82%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKYVNRGTV 774 EHE ++ D +V P+ EVA +++++ T+ Sbjct: 110 EHEFVHIHVGRFDGTVAPDFAEVAAWRWIDVPTL 143
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_HALHL (Isopentenyl-diphosphate Delta-isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=idi PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12 Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFT 623 + ++VD + VG E K H LH AF VF+FN + ELLLQ+R+ +K F +W+NTCC HP E GV AA+R+L +E G PV +FT Sbjct: 2 EHVVIVDPEGQRVGTEEKIRAHA-----DGGTLHLAFCVFVFNPRGELLLQRRADSKYHFSGLWSNTCCGHPRPGE---------GVTEAAERRLGEEFGFVTRLHPVAQFT 99
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_STRCO (Isopentenyl-diphosphate Delta-isomerase OS=Streptomyces coelicolor GN=idi PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.649e-11 Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 3 Query: 300 LVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGI 590 LVDEN +G K + H + LHRAFSVFLF+ + LL+QQR+ K P VW+NTCC HP E+ AA R+ +ELG+ Sbjct: 24 LVDENGVTIGTAEKLSAH-----QPPGRLHRAFSVFLFDERGRLLIQQRALGKYHSPGVWSNTCCGHPYPGEAPFA---------AAARRTFEELGV 106 HSP 2 Score: 21.557 bits (44), Expect = 1.649e-11 Identity = 9/30 (30.00%), Postives = 16/30 (53.33%), Query Frame = 1 Query: 673 EHELDYLLFXXRDVSVNPNPDEVAEYKYVN 762 E E ++L + P+P+EVA +V+ Sbjct: 130 EQEYNHLFVGLVQAELRPDPEEVAGTAFVS 159
BLAST of DR405658 vs. ExPASy Swiss-Prot
Match: IDI_SACEN (Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=idi PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 288 DECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICAEDVPVDEFTPLGRILYKA 650 ++ +L++++ + +G +K H ++ LH AFS ++FN + +LLL QR+ K T+P VWTNTCC HP +E+ + A R+L +ELG+ D+ + L R Y+A Sbjct: 2 EQVVLLNDSGQAIGVTDKATVHHLD-----TPLHLAFSCYVFNGRGQLLLTQRAHEKRTWPGVWTNTCCGHPAPQEA---------MPEAITRRLGEELGLTVRDLTL----VLPRFRYRA 104 The following BLAST results are available for this feature:
BLAST of DR405658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405658 ID=DR405658; Name=DR405658; organism=Citrus sinensis; type=EST; length=776bpback to top |