DR405610

Overview
NameDR405610
Unique NameDR405610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHL 107
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_HUMAN (Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 41/102 (40.20%), Postives = 54/102 (52.94%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHL 107
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHL 107
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHL 107
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCL 107
[Close]
BLAST of DR405610 vs. ExPASy Swiss-Prot
Match: FRIH_TRIVU (Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 1 
Query:  352 RQKYEDECEAAINEQINVEYNVSYVYHALNAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALXXMELALSL 657
            RQ Y  + EAAIN QIN+E   SYVY +++ YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L  ME AL L
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHL 107
The following BLAST results are available for this feature:
BLAST of DR405610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
FRIH_PONAB7.461e-1140.20Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]
FRIH_HUMAN7.461e-1140.20Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 ... [more]
FRIH_FELCA7.461e-1138.24Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH_CANFA7.461e-1138.24Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRIH_BOVIN7.461e-1138.24Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH_TRIVU9.744e-1138.24Ferritin heavy chain OS=Trichosurus vulpecula GN=F... [more]

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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242P20 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242P20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405610 ID=DR405610; Name=DR405610; organism=Citrus sinensis; type=EST; length=657bp
GGGGATCATCAGATCAGTCGGCTGCCATTCTTCTTCATCAAATTCATTTG
CTTTCTTCCTTCAATCTCCATTACGCACTTGCTTACAGCAATGGCATTGG
CAGCTTCTTCATCCTCCTCTCTTGCAGCGAAGCAACTGGCTGGTCTTACA
ACAGGCTCATCATGTTACTCTAAGTCTAATGCTTCTCTTGTGAAATTGGG
TGGTATTTTGCCAAGAACGAAGAGGAGTCTGAAGGTTTCTGCTGCTGTGG
ACGCCAATAGCATGCCGCTGACCGGGGTCGTGTTTCAGCCATTCAAAGAG
GTCAAGAAAGAGGTTCTTGATGTTCCTGTTTCCCCTCTGCTTTCACTAGC
TCGCCAAAAGTACGAGGACGAGTGTGAGGCCGCTATCAACGAGCAGATCA
ATGTGGAATATAATGTCTCATACGTGTACCATGCCCTGAATGCGTACTTT
GATCGGGATAATATTGCTCTGAGAGGCCTTGCCAAATTTTTCAAGGAGTC
CAGTGAAGAAGAAAGGGAACATGCTGAGAAGTTTATGGAGTATCAGAACT
TGCGCGGTGGAAAAGTAAAACTGCACTCCATAATGCAGCCCCCTTCGGAG
TTTGATCATGCAGAGAAAGGGGATGCCTTGTANNNAATGGAACTAGCATT
GTCCCTG
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