DR405590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_SORBI (50S ribosomal protein L33, chloroplastic OS=Sorghum bicolor GN=rpl33 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVILEC SCVR G NKES GISRY TQKNRHNTP +LELRKFC YC KHT H EIKK Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_SACOF (50S ribosomal protein L33, chloroplastic OS=Saccharum officinarum GN=rpl33 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVILEC SCVR G NKES GISRY TQKNRHNTP +LELRKFC YC KHT H EIKK Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_SACHY (50S ribosomal protein L33, chloroplastic OS=Saccharum hybrid GN=rpl33 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVILEC SCVR G NKES GISRY TQKNRHNTP +LELRKFC YC KHT H EIKK Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_PHAAO (50S ribosomal protein L33, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl33 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK++R+ VILECT CVR GVNKE GISRYITQKNRHNTP+RLE RKFC YC K+T+HGEIKK Sbjct: 1 MAKGKDIRIIVILECTCCVRKGVNKELLGISRYITQKNRHNTPNRLEFRKFCRYCQKYTIHGEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_MAIZE (50S ribosomal protein L33, chloroplastic OS=Zea mays GN=rpl33 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVILEC SCVR G NKES GISRY TQKNRHNTP +LELRKFC YC KHT H EIKK Sbjct: 1 MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_ORYSJ (50S ribosomal protein L33, chloroplastic OS=Oryza sativa subsp. japonica GN=rpl33 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVIL+C SCVR G N+ES GISRY TQKNRHNTP +LELRKFC YC KHT+H EIKK Sbjct: 1 MAKGKDVRIRVILQCVSCVRKGANEESAGISRYSTQKNRHNTPGQLELRKFCRYCRKHTIHAEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_ORYSI (50S ribosomal protein L33, chloroplastic OS=Oryza sativa subsp. indica GN=rpl33 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVIL+C SCVR G N+ES GISRY TQKNRHNTP +LELRKFC YC KHT+H EIKK Sbjct: 1 MAKGKDVRIRVILQCVSCVRKGANEESAGISRYSTQKNRHNTPGQLELRKFCRYCRKHTIHAEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_ORYSA (50S ribosomal protein L33, chloroplastic OS=Oryza sativa GN=rpl33 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVIL+C SCVR G N+ES GISRY TQKNRHNTP +LELRKFC YC KHT+H EIKK Sbjct: 1 MAKGKDVRIRVILQCVSCVRKGANEESAGISRYSTQKNRHNTPGQLELRKFCRYCRKHTIHAEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_ORYNI (50S ribosomal protein L33, chloroplastic OS=Oryza nivara GN=rpl33 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAKGK+VR+RVIL+C SCVR G N+ES GISRY TQKNRHNTP +LELRKFC YC KHT+H EIKK Sbjct: 1 MAKGKDVRIRVILQCVSCVRKGANEESAGISRYSTQKNRHNTPGQLELRKFCRYCRKHTIHAEIKK 66
BLAST of DR405590 vs. ExPASy Swiss-Prot
Match: RK33_CUSRE (50S ribosomal protein L33, plastid OS=Cuscuta reflexa GN=rpl33 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24 Identity = 53/68 (77.94%), Postives = 57/68 (83.82%), Query Frame = 3 Query: 489 MAKGKEVRVRVILECTSCVRNGVN--KESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTLHGEIKK 686 MAK K VRV VILECTSC +N VN K + GISRYITQKNRHNTP+RLE +KFCP CYKHTLHGEIKK Sbjct: 1 MAKTKNVRVTVILECTSCAQNNVNVNKVATGISRYITQKNRHNTPNRLEFKKFCPRCYKHTLHGEIKK 68 The following BLAST results are available for this feature:
BLAST of DR405590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405590 ID=DR405590; Name=DR405590; organism=Citrus sinensis; type=EST; length=718bpback to top |