EY728858

Overview
NameEY728858
Unique NameEY728858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBPA (Regulatory protein luxO OS=Vibrio parahaemolyticus GN=luxO PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.751e-17
Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRERSD-----KSQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAV---VEDRSDS-----PLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLRER +        LL ++  EE G   V           ++ WPGNVRQL+ VLR +  L +   I L+ LP  + Q   +P+V   +E ++ +     PL   E++A+  A+E    ++   A  L VS +T+YRKL+
Sbjct:  279 KEVQEGRFREDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEE-GKNFVRFSQEVIDRFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPLDRPSVSKLIEPKAMTVSEIMPLWMTEKMAIEQAIEACDGNIPRAAGYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBVY (Regulatory protein luxO OS=Vibrio vulnificus (strain YJ016) GN=luxO PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.255e-16
Identity = 60/165 (36.36%), Postives = 86/165 (52.12%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRERSD-----KSQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVI-----RQARPQP---AVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLRER +        LL ++  EE G   V    P       + WPGNVRQL+ VLR +  L +   I +E LP  +     R+   QP    ++  R   PL   E+LA+  A++    ++   A  L VS +T+YRKL+
Sbjct:  279 KEVQEGRFREDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEE-GKNFVRFSQPVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKESVQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBVU (Regulatory protein luxO OS=Vibrio vulnificus GN=luxO PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.255e-16
Identity = 60/165 (36.36%), Postives = 86/165 (52.12%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRERSD-----KSQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVI-----RQARPQP---AVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLRER +        LL ++  EE G   V    P       + WPGNVRQL+ VLR +  L +   I +E LP  +     R+   QP    ++  R   PL   E+LA+  A++    ++   A  L VS +T+YRKL+
Sbjct:  279 KEVQEGRFREDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEE-GKNFVRFSQPVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKESVQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBCH (Regulatory protein luxO OS=Vibrio cholerae GN=luxO PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.946e-16
Identity = 61/166 (36.75%), Postives = 85/166 (51.20%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRERSD-----KSQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQA-----RPQPAVVEDRSD----SPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLR R D        LL F+  EE G   V L +   +    + WPGNVRQL+ VLR +  L +   I L+ LP  + Q      R  P   E++       PL   E+ A+  A+E    ++   A  L VS +T+YRKL+
Sbjct:  278 KEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEE-GKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: HUPR_RHOCA (Hydrogenase transcriptional regulatory protein hupR1 OS=Rhodobacter capsulatus GN=hupR1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.946e-16
Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = -3
Query:   64 VEDGSFREDLYYRLNGLEIALPPLR-ERSDKSQLLDFLLAEET---GDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRS-------DSPLDD----AERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 525
            V +G FR DLYY L+  EIALPPLR  R D + L   +LAE     G Q +  D+ A + L  + WPGN+R+L   +  +     D  +G E +   I QA P  +   DRS       D  L D     E   L   L + RW+ S  A +LG+SR  L  KL ++GI
Sbjct:  312 VAEGRFRADLYYALSAGEIALPPLRARRGDVALLAQSMLAEAAVRHGKQALGFDAAALEFLENYDWPGNLRELHNEVTRMLIFAQDNVLGAELISRHILQAAPSESGA-DRSAEEVMTADGTLKDRIELIEMRILRETLTRNRWNKSRAAAELGLSRVGLRAKLDRYGI 479          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: ZRAR_KLEOX (Transcriptional regulatory protein zraR OS=Klebsiella oxytoca GN=zraR PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.024e-16
Identity = 56/157 (35.67%), Postives = 76/157 (48.41%), Query Frame = -3
Query:   73 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRK 531
            E V  G FR+DLYYRLN + I +PPLR R  D   L  + L   AE            A   L+ +AWPGN+R+L   +     L     I   +LP  I       A   D S  PL + E+ A+L ALE+   + +  A +LG++R TL  KL +
Sbjct:  287 EEVSAGRFRQDLYYRLNVVTIDMPPLRHRREDIPPLARYFLQRYAERNRKAVQGFTPQAMDLLIHYAWPGNIRELENAVERAVVLLTGEYISERELPLAITGTPVADAPHGDDSIQPLVEVEKEAILAALERTGGNKTEAARRLGITRKTLLAKLSR 443          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LIHY_BACST (Limonene hydroxylase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.562e-16
Identity = 53/154 (34.42%), Postives = 83/154 (53.90%), Query Frame = -3
Query:   73 GSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEE-----TGDQPVLLDSPARQALLAFAWPGNVRQLRTVL-RTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRK 516
            GSFR DLYYRLN   I +PPLR+R +  + L     +       G     L + A Q L ++ WPGN+R+LR V+ R      D+  I    LP  I+ A      +   S + L D E+  +  AL++ +  ++  A++LG++R+TLYRK+++
Sbjct:  385 GSFRSDLYYRLNVFTIHIPPLRDRKEDIETLSLQFLKNFHQHYCGKGTCHLSNSALQLLQSYNWPGNIRELRNVIERAFLLAIDEPEILPIHLPEEIQNAN---CAIPPSSVNNLKDVEKKMIEQALKESK-SLTEAAKKLGITRSTLYRKIKQ 534          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBHB (Luminescence regulatory protein luxO OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=luxO PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16
Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLP-----AVIRQARP---QPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLRER  D  ++   LL   + E G   V       +   ++ WPGNVRQL+ VLR +  L +   I L+ LP      V+RQ+     +P ++      PL   E++A+  A++    ++   A  L VS +T+YRKL+
Sbjct:  279 KEVQEGRFREDLYYRLYVIPLHLPPLRERGKDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQSVAKFIEPDIMTVSDIMPLWMTEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: LUXO_VIBHA (Luminescence regulatory protein luxO OS=Vibrio harveyi GN=luxO PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16
Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = -3
Query:   76 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLP-----AVIRQARP---QPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 531
            + V++G FREDLYYRL  + + LPPLRER  D  ++   LL   + E G   V       +   ++ WPGNVRQL+ VLR +  L +   I L+ LP      V+RQ+     +P ++      PL   E++A+  A++    ++   A  L VS +T+YRKL+
Sbjct:  279 KEVQEGRFREDLYYRLYVIPLHLPPLRERGKDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQSVAKFIEPDIMTVSDIMPLWMTEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQ 442          
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: ALGB_PSEPK (Alginate biosynthesis transcriptional regulatory protein algB OS=Pseudomonas putida (strain KT2440) GN=algB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16
Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = -3
Query:   64 ERVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL-DFLLA---EETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531
            E V +  FREDL YRLN + + LPPLRERS+   +L D  LA   +E           AR ALL + WPGN+R+LR V+   + +C   R+ +  L    + A   P V    S   LD+ ER A + A+      +   A+ LG+  +TLYRK +++ +
Sbjct:  293 EMVRESRFREDLLYRLNVITLHLPPLRERSEDILILADRFLARFVKEYSRPARGFSDEARTALLNYRWPGNIRELRNVVERASIICPQERVEISHLGMGEQPAGSAPRVGAALS---LDELER-AHIGAVLAASDTLDQAAKTLGIDASTLYRKRKQYNL 448          
The following BLAST results are available for this feature:
BLAST of EY728858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
LUXO_VIBPA7.751e-1735.76Regulatory protein luxO OS=Vibrio parahaemolyticus... [more]
LUXO_VIBVY2.255e-1636.36Regulatory protein luxO OS=Vibrio vulnificus (stra... [more]
LUXO_VIBVU2.255e-1636.36Regulatory protein luxO OS=Vibrio vulnificus GN=lu... [more]
LUXO_VIBCH2.946e-1636.75Regulatory protein luxO OS=Vibrio cholerae GN=luxO... [more]
HUPR_RHOCA2.946e-1637.28Hydrogenase transcriptional regulatory protein hup... [more]
ZRAR_KLEOX5.024e-1635.67Transcriptional regulatory protein zraR OS=Klebsie... [more]
LIHY_BACST6.562e-1634.42Limonene hydroxylase OS=Bacillus stearothermophilu... [more]
LUXO_VIBHB8.570e-1635.37Luminescence regulatory protein luxO OS=Vibrio har... [more]
LUXO_VIBHA8.570e-1635.37Luminescence regulatory protein luxO OS=Vibrio har... [more]
ALGB_PSEPK8.570e-1636.25Alginate biosynthesis transcriptional regulatory p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-E07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728858 ID=EY728858; Name=EY728858; organism=Citrus sinensis; type=EST; length=533bp
CTCGTAAAACATCGAGGCAGGTTAGCGTAGGGTGGGAAAAATCGCACCCT
TTAGCTAACGGGCGATCCCGTGTTTGCGCAGTTTTCTATACAAGGTGTTA
CGGCTAACCCCCAGTTGCTCCGCCGTGTGGCTCATGTGCCAGCGCTGTTG
CTCCAAGGCATTGAGCAGCGCCAGGCGCTCTGCATCGTCCAAGGGCGAAT
CCGAACGGTCCTCCACTACTGCCGGCTGCGGGCGCGCCTGGCGAATGACC
GCCGGCAGGTCCTCGAGCCCAATCCGTCCGTCGTCACACAATGCCGCCAA
CGTGCGCAGCACCGTGCGCAACTGCCGTACATTGCCCGGCCAGGCAAATG
CCAACAGTGCCTGACGCGCAGGGCTGTCGAGCAACACCGGCTGGTCGCCC
GTCTCCTCAGCCAATAGAAAGTCGAGCAGTTGCGACTTATCGCTGCGCTC
ACGCAACGGCGGCAGGGCGATTTCCAGACCGTTCAGCCGGTAGTACAGGT
CTTCGCGAAAACTGCCGTCCTCTACCCGCTCCA
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