EY728858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: FLBD_CAUCR (Transcriptional regulatory protein flbD OS=Caulobacter crescentus GN=flbD PE=4 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.787e-13 Identity = 57/175 (32.57%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 61 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQL-----RTVLRTLAALCDDGRIGLED----LPA---VIRQARPQPAVVEDRS--DSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIA 531 + V+DG+FREDL YRLN + + LPPLRER +D L +F + + G + + + A++ L+A WPGNVR+L R VL + ++ I L D PA + + A R+ S + + E+ +++ LE + +H A LG+S TL KL+++ A Sbjct: 266 QAVKDGTFREDLLYRLNVVNLRLPPLRERPADVISLCEFFVKKYSAANGIEEKPISAEAKRRLIAHRWPGNVRELENAMHRAVLLSAGPEIEEFAIRLPDGQPMAPAPDVAVARGAQMAADAASRAFVGSTVAEVEQQLIIDTLEHCLGNRTHAANILGISIRTLRNKLKEYSDA 440
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRX_AZOC5 (Nitrogen assimilation regulatory protein ntrX OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ntrX PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13 Identity = 59/170 (34.71%), Postives = 84/170 (49.41%), Query Frame = -3 Query: 64 ERVEDGSFREDLYYRLNGLEIALPPLRE-RSDKSQLLDF---LLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALC---DDGRIGLEDLP---AVIRQARPQPAVVEDRSDSPLDDA----ERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531 E + G FREDLY+RL+ + I +PPL E R D L+DF L+++ TG Q + A L + WPGNVRQLR + L L D + LP + P E PL +A ER L + + ++S TAE +G+ R+ L+RKL+ G+ Sbjct: 284 EEIAAGRFREDLYHRLSVVPIRVPPLAERREDIPDLVDFFIDLISQTTGLQRRKVGEDAMAVLQSHDWPGNVRQLRNNVERLLILAGGDPDAEVTASMLPPDVGALVPTLPNGNGGEHLMGLPLREAREVFEREYLAAQINRFGGNISRTAEFVGMERSALHRKLKALGV 453
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: HOXA_BRAJA (Hydrogenase transcriptional regulatory protein hoxA OS=Bradyrhizobium japonicum GN=hoxA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.199e-13 Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = -3 Query: 37 VEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLLA--EETGDQPVLLDSPARQALLAFA---WPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSD------SPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR*LKGAIF 525 VE G FR DLYYRL + +P LRER D + + +L+ + + ++P L AR AL F WPGNVR+L+ ++ +A L D + L R P R + ++D E+ ++N LE+ ++S A +LG+SR L KL ++ + + KG F Sbjct: 312 VEAGRFRRDLYYRLAAFPVHMPALRERPMDIPLIAEGVLSAVKSSFNRPNL--RFARSALEEFGKYHWPGNVRELQNEIQRMAVLADRDELAAPPLLGRRNGKRSAPLPAHGRLNGSASLKDKVEDLEKSVIMNCLERNDGNISRVASELGLSRVGLRNKLSRYDLRKNAKGDAF 484
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: TYRR_ECOLI (Transcriptional regulatory protein tyrR OS=Escherichia coli (strain K12) GN=tyrR PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = -3 Query: 58 ERVEDGSFREDLYYRLNGLEIALPPLRERSDK----SQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAE---RLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR 531 E V+ G FREDLYYRLN L + LPPLR+ ++L A+E G L + L +AWPGNVRQL+ + D + +D+ A AV ED + LD+ ++L L + A++LGVS + KLR++G+++ Sbjct: 345 ELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDA-ATVAVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ 508
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NTRC_BRASR (Nitrogen assimilation regulatory protein OS=Bradyrhizobium sp. (strain RP501 Parasponia) GN=ntrC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.869e-13 Identity = 59/182 (32.42%), Postives = 84/182 (46.15%), Query Frame = -3 Query: 76 VEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLD--FLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCD---------DGR-------------IGLEDLPAVIR-------QARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 525 ++ G FREDL++RLN + + +PPLRER D L+ F LAE+ G P LD+ A + L WPGNVR+L + R LAAL DG +G+++L + P L + E L AL R + A+ LG++RNTL +K+R Sbjct: 288 IQQGLFREDLFFRLNVVPLRVPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELENLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNGVPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIR 469
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: TYRR_ENTAG (Transcriptional regulatory protein tyrR OS=Enterobacter agglomerans GN=tyrR PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = -3 Query: 58 ERVEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLL---AEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAE---RLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR 531 E V+ G FREDL+YRLN L + LPPLRER D L + + A+E G L S L+ + WPGNVRQL+ L + + +D+ V+ + ++ E+ + LD ++L L A++LGVS + KLR++G+ + Sbjct: 353 ELVQRGEFREDLFYRLNVLTLNLPPLRERVQDIMPLTEIFVARFADEQGIPRPRLSSQLNAFLMRYNWPGNVRQLKNALYRALTQLEGHELRPQDI--VLPEQALDVSLGEEAMEGTLDQITSRFERSILTRLYLSYPSTRKLAKRLGVSHTAIANKLREYGLGQ 515
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: HRPR_PSESY (Pathogenicity locus probable regulatory protein hrpR OS=Pseudomonas syringae pv. syringae GN=hrpR PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.513e-12 Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 61 ERVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFL------LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAV-----IRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIA 531 E VE G FR DL++RLN L + LP LR+R + Q+L +A E G LD+ Q LL+ WPGNVR+L++ A+C RI + AV + R Q V+ E++ + +AL++ R + E+L + R TLY ++++ G+A Sbjct: 156 ELVEQGLFRRDLFFRLNVLTLQLPALRKR--REQILPLFDQFTQDIAAECGRSAPTLDNGRVQILLSHDWPGNVRELKSAAN---AICP--RIAVAGRRAVEARDPVTGLRMQMRVI-----------EKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGVA 305
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: TYRR_SALTY (Transcriptional regulatory protein tyrR OS=Salmonella typhimurium GN=tyrR PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 53/165 (32.12%), Postives = 79/165 (47.88%), Query Frame = -3 Query: 58 ERVEDGSFREDLYYRLNGLEIALPPLRERSDK----SQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAE---RLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR 531 E V+ G FREDLYYRLN L + LPPLR+ ++L A+E G L + L + WPGNVRQL+ + + + +D+ A AV ED + LDD ++L L + A++LGVS + KLR++G+++ Sbjct: 345 ELVQKGLFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLSADLSTVLTRYGWPGNVRQLKNAIYRALTQLEGYELRPQDILLPDYDA-ATVAVGEDAMEGSLDDITSRFERSVLTQLYRSYPSTRKLAKRLGVSHTAIANKLREYGLSQ 508
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: TYRR_SALTI (Transcriptional regulatory protein tyrR OS=Salmonella typhi GN=tyrR PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 53/165 (32.12%), Postives = 79/165 (47.88%), Query Frame = -3 Query: 58 ERVEDGSFREDLYYRLNGLEIALPPLRERSDK----SQLLDFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAE---RLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR 531 E V+ G FREDLYYRLN L + LPPLR+ ++L A+E G L + L + WPGNVRQL+ + + + +D+ A AV ED + LDD ++L L + A++LGVS + KLR++G+++ Sbjct: 345 ELVQKGLFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLSADLSTVLTRYGWPGNVRQLKNAIYRALTQLEGYELRPQDILLPDYDA-ATVAVGEDAMEGSLDDITSRFERSVLTQLYRSYPSTRKLAKRLGVSHTAIANKLREYGLSQ 508
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: PRPR_SALTY (Propionate catabolism operon regulatory protein OS=Salmonella typhimurium GN=prpR PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = -3 Query: 76 VEDGSFREDLYYRLNGLEIALPPLRER-SDKSQLLDFLLAEETGDQPVLLDSPARQA-------LLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQ--PAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLR 525 + G FR DL+YRL+ L + LPPLRER +D L + L + + R LLA+ WPGN+R+LR ++ LA + ++ P + RQ Q P ++ + ++ + AL + L + + + A LG+SR TL+R+L+ Sbjct: 378 IMQGRFRPDLFYRLSILRLTLPPLRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWRWPGNIRELRNMMERLALF-----LSVDPAPTLDRQFMRQLLPELMVNTAELTPSTVDANALQDVLARFKGDKTAAARYLGISRTTLWRRLK 532 The following BLAST results are available for this feature:
BLAST of EY728858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728858 ID=EY728858; Name=EY728858; organism=Citrus sinensis; type=EST; length=533bpback to top |