EY728858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: DHAR_CITFR (Glycerol metabolism operon regulatory protein OS=Citrobacter freundii GN=dhaR PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.976e-12 Identity = 44/159 (27.67%), Postives = 77/159 (48.43%), Query Frame = -3 Query: 64 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLA---EETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPL--DDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 525 VE F LYY L+ EI +PPLR R + L + ++ + +D A L+A++WPGN +L +++ +A D+G I L +LP + RP + L E+ A+++A + ++ L + R TL+RK++++ I Sbjct: 472 VEQNRFSRQLYYALHSFEIVIPPLRARRNSIPSLIYTRLNSLKKRFSSSLKIDDDALAQLVAYSWPGNDFELNSIIENIAISSDNGHIRLSNLPDYLFAERPGLETASSLLPASLTFTAIEKEAIIHAARVTSGRVQEMSQLLNIGRTTLWRKMKQYDI 630
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: Y4PA_RHISN (Putative transcriptional regulatory protein y4pA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02110 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.580e-12 Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = -3 Query: 64 RLNGLEIALPPLRERSDKSQLL--DFL--LAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 489 RL + LPPL +R + LL FL L ++ + + +D A + L+ + WP N+R+LR+VL T A C+ I E LP + P P ER +L+AL++ R+ A LG+SR TLY K+R +G+ Sbjct: 464 RLAPGHVFLPPLCDRLEDLPLLAEHFLQALRKDRRSRKLSVDHSAYRVLMTYGWPENIRELRSVLETAAIRCEGDWIKSEHLPPLGDANADAP--------HPHPGEEREWILDALQRHRFRRGEAARYLGISRKTLYNKMRVYGL 601
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: FHLA_SALTY (Formate hydrogenlyase transcriptional activator OS=Salmonella typhimurium GN=fhlA PE=4 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 2.580e-12 Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = -3 Query: 64 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLL----DFLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMS---HTAEQLGVSRNTLYRKLRKHGI 525 V D FR DLYYRLN I LPPLRER + LL F +A G + + + L + WPGNVR+L V+ A L G + LP I P + V SD +D +L ++ L++ ++ A++LG+ R TL ++++ GI Sbjct: 529 VADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVVER-AVLLTRGNVLQLSLPD-ITAVTPDTSPVATESDKEGEDEYQL-IIRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI 686
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: YGEV_ECOLI (Uncharacterized sigma-54-dependent transcriptional regulator ygeV OS=Escherichia coli (strain K12) GN=ygeV PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.673e-11 Identity = 48/168 (28.57%), Postives = 79/168 (47.02%), Query Frame = -3 Query: 70 VEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLD----FLLAEETGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDL--PAVIRQARPQPAVV----------EDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKH 525 + +G FREDL+YRLN + I LPPLRER + +LL L G + + L WPGN+R+L ++ L + G + L P ++ + + V +D + L++ E+ + AL + A++LG+ TLYRK++K+ Sbjct: 421 IAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHN-SKKQVADELGIGIATLYRKIKKY 587
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: NORR_ENT38 (Anaerobic nitric oxide reductase transcription regulator norR OS=Enterobacter sp. (strain 638) GN=norR PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11 Identity = 51/173 (29.48%), Postives = 79/173 (45.66%), Query Frame = -3 Query: 64 ERVEDGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEE----TGDQPVLLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIG-------------LEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGI 531 E V G+FR DL++RL+ +++PPLRER + LL E+ G V+L AR LL++ WPGNVR+L + L R+G E PAV A+ PA+ + + +R + AL+Q + A L + L+R ++ G+ Sbjct: 333 EEVLAGNFRADLFHRLSVFPLSVPPLRERGEDVVLLAGFFCEQCRLKMGLSRVVLSPGARSHLLSYGWPGNVRELEHAIHRAVVLARAARLGDDVVIHARHFALHDEAAPAV---AQELPAIANENLREATEAFQRQMITRALDQNGRSWAACARALEMDVANLHRLAKRLGL 502
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: YFHA_ECOLI (Uncharacterized protein yfhA OS=Escherichia coli (strain K12) GN=yfhA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = -3 Query: 70 GSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEETGD--QPVL--LDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQA-----RPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKH 516 G FREDLYYRLN + + +P L ER++ LL L + + +P + + A + L+ +WPGNVRQL V+ AL I A++ QA P VE R+ L+ +L L+ + +++H A G +R Y+ L +H Sbjct: 287 GEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVIS----DALVEQALEGENTALPTFVEARNQFELNYLRKL-----LQITKGNVTHAARMAGRNRTEFYKLLSRH 435
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: YFHA_ECO57 (Uncharacterized protein yfhA OS=Escherichia coli O157:H7 GN=yfhA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.726e-11 Identity = 50/158 (31.65%), Postives = 77/158 (48.73%), Query Frame = -3 Query: 70 GSFREDLYYRLNGLEIALPPLRERSDKSQLLDFLLAEETGD--QPVL--LDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQA-----RPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHTAEQLGVSRNTLYRKLRKH 516 G FREDLYYRLN + + +P L ER++ LL L + + +P + + A + L+ +WPGNVRQL V+ AL I A++ QA P VE R+ L+ +L L+ + +++H A G +R Y+ L +H Sbjct: 287 GEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVIS----DALVEQALEGENTALPTFVEARNQFELNYLRKL-----LQITKGNVTHAARMAGRNRTEFYKLLSRH 435
BLAST of EY728858 vs. ExPASy Swiss-Prot
Match: TYRR_CITBR (Transcriptional regulatory protein tyrR OS=Citrobacter braakii GN=tyrR PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.301e-11 Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = -3 Query: 58 ERVEDGSFREDLYYRLNGLEIALPPLRE-RSDKSQLLDFLLAEETGDQPV---LLDSPARQALLAFAWPGNVRQLRTVLRTLAALCDDGRIGLEDLPAVIRQARPQPAVVEDRSDSPLDDAERLALLNALEQQRWHMSHT---AEQLGVSRNTLYRKLRKHGIAR 531 E V+ G FREDLYYRLN L + LPPLR+ +D L + +A +Q V L + L + WPGNVR ++ + + + +D+ A AV E+ + LD+ + L Q + T A++LGVS + KLR++G+++ Sbjct: 345 EMVQKGLFREDLYYRLNVLTLNLPPLRDLPADIMPLTELFVARFADEQGVPRPKLSADLSTVLTRYGWPGNVRHVKNAIYRALTQLEGYELRPQDILLPDYDA-ATVAVGEEVMEGSLDEITSRFERSVLTQLYMNYPSTRKLAKRLGVSHTAIANKLREYGLSQ 508 The following BLAST results are available for this feature:
BLAST of EY728858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728858 ID=EY728858; Name=EY728858; organism=Citrus sinensis; type=EST; length=533bpback to top |