EY728851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.052e-52 Identity = 107/144 (74.31%), Postives = 117/144 (81.25%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSARE-ALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRST 444 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS SM +TLERYQK +YG P+ + +E L SS+ EYLKL AR E LQR+Q LGE+LG L KELE LE+QLD L+ IRST Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRST 144 HSP 2 Score: 28.8758 bits (63), Expect = 2.052e-52 Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 444 RTQYMLDYLTELGT*GQLLSEAN*TLNK 527 RTQ+MLD LT+L Q+L EAN L + Sbjct: 145 RTQHMLDQLTDLQRREQMLCEANKCLRR 172
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.999e-50 Identity = 104/142 (73.24%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+S M KTLERYQ+C+YG+ E + ++E SS QEYLKL A+ + LQRS LGE+LG L++KELE LE QLD L+ IRS Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKET--ESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRS 140 HSP 2 Score: 22.7126 bits (47), Expect = 6.999e-50 Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 444 RTQYMLDYLTELGT*GQLLSEAN 512 +TQ+MLD L +L ++L E+N Sbjct: 142 KTQHMLDQLADLQKKEEMLFESN 164
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.971e-45 Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTE 447 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS M KTLERY+ CNY SA ELS+ QEYLKL R E LQ +Q LGE+L PL+ KELE LE Q+++ L IRS++ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSK 144
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.971e-45 Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTE 447 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS M KTLERY+ CNY SA ELS+ QEYLKL R E LQ +Q LGE+L PL+ KELE LE Q+++ L IRS++ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSK 144
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.880e-45 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTE 447 MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFSNRGKLYEFCSS S M +T+++Y+K +Y +PN SA++ + Q+YLKL +R E LQ SQ LGEEL ++ ELE LERQ+D L+ IRST+ Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQD--KYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTK 143
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.515e-44 Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS M KTLERY+ CNY + + E + QEYLKL R E LQ +Q LGE+LGPL+ KELE LE Q+++ LK IRS Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRS 138
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.515e-44 Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS M KTLERY+ CNY + + E + QEYLKL R E LQ +Q LGE+LGPL+ KELE LE Q+++ LK IRS Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRS 138
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.015e-42 Identity = 95/141 (67.38%), Postives = 109/141 (77.30%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438 MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ + KTLERYQ C Y A + N + E S E KL A++EALQR+Q LGE+LGPL+ KEL+ LE+QL+ L R Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSAGITKTLERYQHCCYNAQDSNNALSET--QSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQAR 138
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40 Identity = 91/141 (64.54%), Postives = 104/141 (73.76%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438 MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ + KTLE+Y C Y A N + S QE +L + E LQRSQ LGE+LGPL+ KEL+ LE+QL+ L R Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQAR 140
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 86/142 (60.56%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441 MGRG+V L+RIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS+ G+LY+F SSS+MLKTLERYQ+ Y + + + ++ ++ QEY+ L A E LQ+SQ LGE+L PL + ELE LE Q+ LK IRS Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQ-NNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRS 141 The following BLAST results are available for this feature:
BLAST of EY728851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728851 ID=EY728851; Name=EY728851; organism=Citrus sinensis; type=EST; length=689bpback to top |