EY728851

Overview
NameEY728851
Unique NameEY728851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438
            MGRG++ ++RI+N  +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G+LYEF SS++M   ++RY      A E  +      E+   Q+E   L  +   LQ S    +GEEL  L  ++L+ LE +L++ L+ IR
Sbjct:    1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYT----NAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIR 137          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYL-KLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438
            MGRG++E+KRIEN  +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS  GKL+E+ SS+ M +TL RY   N+ +   + +  +  E+   ++ L KL  ++  LQ       G+ L PL  KEL+SLE+QL   L  +R
Sbjct:    1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRYG--NHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQ-------GKGLNPLTFKELQSLEQQLYHALITVR 132          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.695e-24
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438
            MGRG++ ++RI++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +SSSM   ++RY K      E       A E+   Q+E   L     ALQ +    +GE+L  L+  EL SLE Q+++ L+ IR
Sbjct:    1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKI---EQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIR 138          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 69/146 (47.26%), Postives = 92/146 (63.01%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTEL 450
            MGRG++E+KRIENK +RQVTF+KRR GLLKK +ELSVLCDA++ LIIFS++GKL+E+CS   SM + + RY +   GA  P    R  L      E  K+      LQ S     G++L     +EL  LE+QL+  L  IR+ +L
Sbjct:    4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTT-GASLPVEDNRVQL----YDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKL 144          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 62/146 (42.47%), Postives = 94/146 (64.38%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ-KCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTEL 450
            M RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E  ++ +M   +ERYQ     G  EP    R+ +   ++Q    L    + LQR    + G   G +   +L +LE+ L++++  IR+T++
Sbjct:    1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAGGQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKM 143          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 63/144 (43.75%), Postives = 93/144 (64.58%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441
            MGRG++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS  G+LY+F SSSSM   +ERYQ+    A E +      +  +   Q+E   L  + + L  +    LGEE+     ++L+ L+ Q++M L  IR+
Sbjct:    1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQE----AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRN 139          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 69/201 (34.33%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPE-PNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTELSTCWITLLNWAHRDSC*AKQIRPSTRVMEGISMNTLH*ILCKDMWYWLITTQLQ 612
            MGRG++E+KRIEN  +RQVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+   SM + ++RY K     PE  N +   A      +E  ++      LQ +     G++L  +  +EL  LE+ LD  L  +R+ +L      + N    +    K+                     ++M++WL++ Q+Q
Sbjct:    1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKE--------------------NQEMYHWLMSNQIQ 181          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLD 417
            MGRG++E+KRIEN  NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ GKLY++CS  +S+ + LE+YQ    K  +     ++SA E   +  + + +++  R+           GE+L  L  KEL  +E  LD
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSA-EIDRIKKENDNMQIELRH---------LKGEDLNSLQPKELIMIEEALD 129          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSS-QQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIR 438
            MGRG++ +++I++  +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN  KLY+F +SSS+  T+ER+   N    E       A E+   Q+E   L     +LQ +     G EL  L+ KEL+++E QL+M L+ IR
Sbjct:    1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERF---NTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIR 138          
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1
Query:   16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSML-KTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTE 447
            MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+CS S+ L   L+ YQK +    + A   N+S  E   +  + + +++  R+           GE++  LN KEL  LE  L   L  I + +
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS-NEIDRIKKENDNMQVKLRH---------LKGEDINSLNHKELMVLEEGLTNGLSSISAKQ 139          
The following BLAST results are available for this feature:
BLAST of EY728851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
MAD57_ORYSJ4.459e-2545.77MADS-box transcription factor 57 OS=Oryza sativa s... [more]
AGL15_ARATH7.607e-2549.30Agamous-like MADS-box protein AGL15 OS=Arabidopsis... [more]
AGL21_ARATH1.695e-2446.48Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
FBP24_PETHY2.891e-2447.26MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24... [more]
MAD33_ORYSJ6.439e-2442.47MADS-box transcription factor 33 OS=Oryza sativa s... [more]
MAD25_ORYSJ1.098e-2343.75MADS-box transcription factor 25 OS=Oryza sativa s... [more]
DEF21_ANTMA3.196e-2334.33MADS-box protein defh21 OS=Antirrhinum majus GN=DE... [more]
MADS2_ORYSJ4.174e-2344.60MADS-box transcription factor 2 OS=Oryza sativa su... [more]
AGL17_ARATH5.451e-2345.77Agamous-like MADS-box protein AGL17 OS=Arabidopsis... [more]
MADS2_PETHY1.214e-2242.28Floral homeotic protein PMADS 2 OS=Petunia hybrida... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-009-D10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728851 ID=EY728851; Name=EY728851; organism=Citrus sinensis; type=EST; length=689bp
CCACGCGTCCGGAAAATGGGAAGGGGTAGGGTTGAGTTGAAGAGGATAGA
GAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAATGGCCTAT
TGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGGTTGCTCTC
ATCATTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCAGTAGTTCAAG
CATGCTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTATGGAGCACCAG
AACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAGCCAGCAAGAA
TATCTGAAGCTTANAGCACGATATGAAGCCCTACAGAGATCCCAAGGAAT
CTCCTTGGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCTTGAGTCAC
TTGAAAGGCAGCTTGATATGTTCTTGAAGCCGATCAGATCAACAGAACTC
AGTACATGCTGGATTACCTTACTGAACTGGGCACATAGGGACAGTTGCTG
AGCGAAGCAAATTAGACCCTCAACAAGGGTGATGGAAGGGATATCAATGA
ACACACTTCATTGAATCTTATGCAAAGATATGTGGTATTGGCTTATAACA
ACTCAACTCCAGGCGATACTTCCTTTTCGCCTTGGAATGTGACCCCACTT
GCAATTGGATATCCCCTTGGGACCCATATCCGTGTCCAA
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