EY728851
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18 Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 22 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISL----GEELGPLNSKELESLERQLDMFLKPIRSTE 447 R R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++R Y + + E +L Q E AR + + L GEEL LN ++L+ LE+ L+ L + T+ Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDR-----YNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTK 161
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18 Identity = 63/150 (42.00%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELSSQ-QEYLKLXARYEALQRSQGISLGEELGPLNSK--ELESLERQLDMFLKPIRS--TEL 450 MGR +VE+KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S +M K ++RY+ + EAL+L+ + + YL L E +Q S EE N+ L SLE QL+ L R+ TEL Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLKELLEIVQ-----SKLEESNVDNASVDTLISLEEQLETALSVTRARKTEL 138
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18 Identity = 61/145 (42.07%), Postives = 86/145 (59.31%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALELS-SQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRSTE 447 M R R E+KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + GEEL L+ EL+ LE+ L+ L + T+ Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTK 141
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17 Identity = 58/144 (40.28%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS--SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLGEELGPLNSKELESLERQLDMFLKPIRS 441 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + +ERY+ + ++ EL L E R + GEE LE+LE L+ ++ +RS Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCDL---LEKQLRFMTVDDGEE---YTVPSLEALEHNLEAAMRKVRS 138
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--------------------QKCNYGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGI 351 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S I Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHKI 131
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--QKCNYGA--PEPNV--------------SAREALELSSQQEYLKLXARYEALQRSQGISL----GEELGPLNSKELESLERQLDMFLKPIRSTE 447 M R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + + L GEEL L+ +EL+ +E+ L+ L+ + T+ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEA-SLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTK 164
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN--------------------YGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLG 360 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N G P+ L ++++Y K+ ++ + R+ I+ G Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPG 134
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN--------------------YGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLG 360 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N G P+ L ++++Y K+ ++ + R+ I+ G Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYNEPHESGTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPG 134
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN--------------------YGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLG 360 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N G P+ L ++++Y K+ ++ + R+ I+ G Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPG 134
BLAST of EY728851 vs. ExPASy Swiss-Prot
Match: MEF2A_BOVIN (Myocyte-specific enhancer factor 2A OS=Bos taurus GN=MEF2A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 16 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCN--------------------YGAPEPNVSAREALELSSQQEYLKLXARYEALQRSQGISLG 360 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N G P+ L ++++Y K+ ++ + R+ I+ G Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAPG 134 The following BLAST results are available for this feature:
BLAST of EY728851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728851 ID=EY728851; Name=EY728851; organism=Citrus sinensis; type=EST; length=689bpback to top |