DR405296

Overview
NameDR405296
Unique NameDR405296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.719e-49
Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVANGLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  290 AKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.719e-49
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 306
            AKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RF+KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  292 AKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPDFTWEVVKPLKYEK 391          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.284e-49
Identity = 91/104 (87.50%), Postives = 99/104 (95.19%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA+G+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGM+ INLDLKRGG GR+LKTAAYGHFGR+  DFTWEVVKPLKWEKP A
Sbjct:  293 AKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEKPSA 396          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.846e-48
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA+GLARR IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  290 AKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.846e-48
Identity = 91/104 (87.50%), Postives = 101/104 (97.12%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  294 AKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 396          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.148e-48
Identity = 91/96 (94.79%), Postives = 95/96 (98.96%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKP 291
            AKSIVANGLARRCIVQVSYAIGVPEPLSV+VD+YGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKP
Sbjct:  290 AKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.111e-48
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 306
            AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL IVKE+FDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLK  K
Sbjct:  292 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKGGK 392          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 9.159e-48
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  294 AKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.041e-47
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA GLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDL +GG+ R+LKTAAYGHFGRDD DFTWE VKPLKWEKPQA
Sbjct:  294 AKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDADFTWETVKPLKWEKPQA 396          
BLAST of DR405296 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.041e-47
Identity = 90/104 (86.54%), Postives = 95/104 (91.35%), Query Frame = 1
Query:    4 AKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 315
            AKSIVA GLARRC+VQVSYAIGV   LS+FVDSYGTG IPDKEIL+I+KE FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLKWEK QA
Sbjct:  290 AKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
The following BLAST results are available for this feature:
BLAST of DR405296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SUASA3.719e-4989.42S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_ORYSJ3.719e-4994.06S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK_WHEAT8.284e-4987.50S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK4_ARATH1.846e-4891.35S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK1_BETVU1.846e-4887.50S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_CARPA3.148e-4894.79S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_MEDFA4.111e-4892.08S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK3_ATRNU9.159e-4888.46S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_ATRNU2.041e-4787.50S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK2_PINCO2.041e-4786.54S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]

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Properties
Property NameValue
Genbank descriptionCSAD-PNP1242A07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405296 ID=DR405296; Name=DR405296; organism=Citrus sinensis; type=EST; length=629bp
GGGGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCA
AGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACT
CATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAG
GAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAA
AAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTG
GCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGG
GAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCT
GTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTT
GCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACA
TGTTCCCCATTCAATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTG
GTTTTGGTTTAATGTACCATGTCACCACTGTTGTGTAGTGATATCGATTG
AGAATTTTGCTCAACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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