DR405268

Overview
NameDR405268
Unique NameDR405268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR405268 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 48/137 (35.04%), Postives = 65/137 (47.45%), Query Frame = 3 
Query:  351 SETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHFGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSVSST--CGTTALTA 755
            S T K+     +  ++P++ SG  ADIG R +M+D  I  D+L   FG       PSAFY VFDGHGG  AA +V  N  +   +D D P+          E+E +                SV+S+   GTTAL A
Sbjct:   48 SGTEKTFENMDAVAYMPVVRSGGWADIGSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPR----------EIEKALSSAFLQTDAAFADACSVNSSLASGTTALAA 174
The following BLAST results are available for this feature:
BLAST of DR405268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
P2C57_ORYSJ5.630e-1135.04Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O22 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405268 ID=DR405268; Name=DR405268; organism=Citrus sinensis; type=EST; length=757bp
GGGGAGGTTACGCAACTAAAGTAGCTTTACAAATTCGTTCGTTCGTTCAT
TCATNNNACTGTTTTCCAATCTTCTTCTTCACAAATTTTCACTGGTTAAT
CTGAAAATACGACGTAGTTTTGGATATGATTGTGGGTCAAAAAATGGTGG
CGGAAACAGAGATAATTTGCAAAGCTACTGCTGTTTTAGACTTAGGTTTG
CAGTTCAATGTGAAAGATCAAAACTTGCAGATCGATGTTAATCTCAAGAA
CAAGAATAGTAGCCCTCCTTCAACTCCAAGATTCCATGAACTTCGTGTTT
CTGACTCAGTTTCCTCTGAAATCTCCTGTTTTGAATCGGTGGTCAGTTGT
TCAGAGACCGTTAAAAGTACTGTTATGGAGACTTCGGCAGTGTTTGTCCC
AATCATTTGTTCTGGCAGCTGTGCTGACATTGGACCAAGGATCTCCATGG
ATGATGAGCACATTCGGATTGATGATCTATCTGCCCACTTTGGATCTCTC
TTTAAGTGTCCTACTCCAAGTGCTTTCTATGCAGTGTTTGATGGTCATGG
TGGACCTGAGGCAGCTGTTTATGTCAAGGAGAATGCTATGAAATTATTTT
TTAAGGATGCTGATATGCCCCAAACATCTGATATCAATGATGTCTTCTTA
GCAGAGTTGGAGAATTCTCATAAGAAAGCATTTTTACTGGCAGACCTTGC
CTTGGCTGATGAACGCAGTGTTAGTAGTACGTGTGGAACAACTGCTCTGA
CTGCCTT
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