DR405251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_SACHY (ATP-dependent Clp protease proteolytic subunit OS=Saccharum hybrid GN=clpP PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 72/166 (43.37%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNSC (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9605) GN=clpP2 PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 68/142 (47.89%), Postives = 97/142 (68.31%), Query Frame = 3 Query: 306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +YLYIN PGG V L I+ TMQ +K V T CVG A + FLL G KG RS++ SRI + P G A+GQA DIR +ADE+L +++ + KELS +TGQ Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQ 158
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_RANMC (ATP-dependent Clp protease proteolytic subunit OS=Ranunculus macranthus GN=clpP PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32 Identity = 71/165 (43.03%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 MPIG PKV +R PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D+++ ++L+IN PGG V P +AIY TMQ + V T C+G A + FLL GGE R A P +R+ + PA + Q + EA+ELL +R+ + + ++TG P Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYR-LHRERLLFLGQGVDSEISNQLIGLMVYLSLEDETRDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNP 164
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_HORVU (ATP-dependent Clp protease proteolytic subunit OS=Hordeum vulgare GN=clpP PE=3 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_AGRST (ATP-dependent Clp protease proteolytic subunit OS=Agrostis stolonifera GN=clpP PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I K + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITKVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMP (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32 Identity = 67/148 (45.27%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 288 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731 GS + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +Y+YIN PGG V L I+ TMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNTELSERTGK 158
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_WHEAT (ATP-dependent Clp protease proteolytic subunit OS=Triticum aestivum GN=clpP PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYAVRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSJ (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=clpP PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSI (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. indica GN=clpP PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ORYSA (ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa GN=clpP PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166 The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bpback to top |