DR405251

Overview
NameDR405251
Unique NameDR405251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38
Identity = 81/166 (48.80%), Postives = 106/166 (63.86%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAA-RGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737
            MPIGTP V YR PG    +WVD++  L  ER++F+GQ + +  +N ++A MLYLDS D +K +YLYIN PGG VT  LAIY TM+ +KS V T CVG A  +  FLL  G KG R A+P SRI +  P G   + QA DI  EA E+L ++D +   ++  TGQ F
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSF 166          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_CHAVU (ATP-dependent Clp protease proteolytic subunit OS=Chara vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.963e-37
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D+E +NQ++  M+YL+  DDSK +++YIN PGG V   +A++  MQ +   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   GQA +   EA+E+L +RD I K    +TGQP
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWVDIYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDSKEMFMYINSPGGSVVAGIAVFDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPHARVMIHQPASSYYDGQAGECLMEAEEVLKLRDCIAKVYMNRTGQP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=clpP PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   DD+K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ + K   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ANTFO (ATP-dependent Clp protease proteolytic subunit OS=Anthoceros formosae GN=clpP PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37
Identity = 76/165 (46.06%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    W+D++N LYRER++F+GQ++D+E +NQ++  M+YL+  D+SK +YLYIN PGG V   +++Y TMQ +   V T C+G A  +  F+L GGE   R A+P +RI +  PA +   GQA +   EA+E+L +RD I K   ++TG+P
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDESKDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARIMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ADICA (ATP-dependent Clp protease proteolytic subunit OS=Adiantum capillus-veneris GN=clpP PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    WVD++N LYRER++F+GQ +D+E +NQ++  M+YL+S D +K +YLY+N PGG V   +++Y  MQ +   V T C+G A  +  F+LAGGE   R A+P +R+ +  PA +   GQA +   EA+E+L +RD I K  +++TG+P
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQAKDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPHARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITKVYAQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNY3 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Synechocystis sp. (strain PCC 6803) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 78/164 (47.56%), Postives = 109/164 (66.46%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            MPIG P V +R PG    +W+D++  L +ER+IF+GQ +++  +N+I+A +LYLDS D SK +YLYIN PGG VT  +AIY TMQ +K+ V T CVG A  +  FLLA G  G R A+P +RI +  P  G  R QA DI  EA E+L +R  + + ++++TGQ
Sbjct:    1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPSKPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPHARIMIHQPMGGTGRRQATDIDIEAREILRIRQQLNEIMAQRTGQ 164          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_STAPU (ATP-dependent Clp protease proteolytic subunit OS=Staurastrum punctulatum GN=clpP PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 74/165 (44.85%), Postives = 110/165 (66.67%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG P+V +R PGE    WVD++N LYRER++F+GQN+D+E +NQ++  M+YL+  D+SK +Y+YIN PGG V   +++Y  MQ +   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   GQA +   EA+E+L +RD I K   ++TG+P
Sbjct:    1 MPIGVPRVPFRLPGEEEAVWVDVYNRLYRERLLFLGQNVDDEIANQLIGIMIYLNGEDESKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDGQAGECMMEAEEVLKLRDCITKVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PANGI (ATP-dependent Clp protease proteolytic subunit OS=Panax ginseng GN=clpP PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 77/166 (46.39%), Postives = 109/166 (65.66%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +  E SNQ++  M+YL   DD+K +YL++N PGG V P +AIY TMQ ++  V T C+G A  +  F+LAGGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +   +KTG+PF
Sbjct:    1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDTKDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKTGKPF 166          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_COFAR (ATP-dependent Clp protease proteolytic subunit OS=Coffea arabica GN=clpP PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 76/165 (46.06%), Postives = 109/165 (66.06%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   DD+K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJB (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. GN=clpP1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 81/165 (49.09%), Postives = 106/165 (64.24%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG P+V YR PGE   QW+ L + LY+ER++FIG+ ID+  +N I+  MLYL+S D  K + +YIN PGG VT  +AIY TM  +K  + T CVG A  +  FLLA G KG R A+P SRI L  P+ G  +GQA DI   A E L V+  + + L++ TGQP
Sbjct:    1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQP 165          
The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_PROMM6.747e-3848.80ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_CHAVU1.963e-3745.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SPIOL4.373e-3746.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANTFO4.373e-3746.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ADICA5.711e-3745.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNY35.711e-3747.56Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP_STAPU9.742e-3744.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PANGI9.742e-3746.39ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COFAR9.742e-3746.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNJB9.742e-3749.09ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bp
GGGGGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAAACATGTCCGTT
TCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTCAAGCT
TTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGGGAAAC
CTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCC
GGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATGCCGAT
TGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAAT
GGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGG
CAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTA
TCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTC
CCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGNNACTATGCAGAGC
TTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGC
AGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTC
TTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCT
GATGACATTCGTAATGAAGCAGATGAGCTTCTTGGAGTCAGAGATTACAT
TTTCAAGGAGTTGTCTAGGAAAACAGGTCAGCCCTTTG
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