DR405251

Overview
NameDR405251
Unique NameDR405251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_TOBAC (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum GN=clpP PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 74/165 (44.85%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   D++K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PHAAO (ATP-dependent Clp protease proteolytic subunit OS=Phalaenopsis aphrodite subsp. formosana GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQI+  M+YL   DD++ +YL+IN PGG V P +AIY TMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA D   EA+ELL +R+ + K   ++TG P
Sbjct:    1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRTGNP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_NICTO (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tomentosiformis GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 74/165 (44.85%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   D++K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_NICSY (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana sylvestris GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 74/165 (44.85%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   D++K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_LOTJA (ATP-dependent Clp protease proteolytic subunit OS=Lotus japonicus GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ ++ E SNQ++  M+YL   DD K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+LAGG+   R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDKKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_LEPVR (ATP-dependent Clp protease proteolytic subunit OS=Lepidium virginicum GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ++D E SNQ+++ M+YL    D+K +YL+IN PGG V   +AIY TMQ ++  V T C+G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_LEPTE (ATP-dependent Clp protease proteolytic subunit OS=Leptosira terrestris GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 71/164 (43.29%), Postives = 108/164 (65.85%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MP+G PKV Y  P E    W+DL++ LY+ER+I I  ++++E  NQI++ ++YL + DDSK  ++YIN PGG VT  +AIY  M+   +PV T  VG +  +A F+LAGG+ G R A P SRI +  P G + GQ+ +I +EA E++ +R  + +  +++TGQP
Sbjct:    1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDSKEFFIYINSPGGSVTSGIAIYDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPHSRIMIHQPEGGSEGQSSEIVHEAQEVVRIRRQVARIYAQRTGQP 164          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ILLOL (ATP-dependent Clp protease proteolytic subunit OS=Illicium oligandrum GN=clpP PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.315e-36
Identity = 76/165 (46.06%), Postives = 107/165 (64.85%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P +AIY TMQ +   V T C+G A  +  FLLAGGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +  +++TG P
Sbjct:    1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYAQRTGNP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_OLIPU (ATP-dependent Clp protease proteolytic subunit OS=Olimarabidopsis pumila GN=clpP PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL    D+K +YL+IN PGG V   +AIY TMQ ++  V T C+G A  +A F+L GG    R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_EUCGG (ATP-dependent Clp protease proteolytic subunit OS=Eucalyptus globulus subsp. globulus GN=clpP PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   +D+K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  F+L GGE   R A P +R+ +  PA +    Q  +   EA+ELL +R+ I +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDNKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKP 165          
The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_TOBAC6.315e-3644.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PHAAO6.315e-3646.67ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NICTO6.315e-3644.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NICSY6.315e-3644.85ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LOTJA6.315e-3645.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LEPVR6.315e-3645.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LEPTE6.315e-3643.29ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ILLOL6.315e-3646.06ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_OLIPU8.247e-3645.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUCGG8.247e-3645.45ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bp
GGGGGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAAACATGTCCGTT
TCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTCAAGCT
TTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGGGAAAC
CTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCC
GGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATGCCGAT
TGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAAT
GGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGG
CAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTA
TCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTC
CCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGNNACTATGCAGAGC
TTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGC
AGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTC
TTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCT
GATGACATTCGTAATGAAGCAGATGAGCTTCTTGGAGTCAGAGATTACAT
TTTCAAGGAGTTGTCTAGGAAAACAGGTCAGCCCTTTG
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