DR405251

Overview
NameDR405251
Unique NameDR405251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_HAHCH (ATP-dependent Clp protease proteolytic subunit OS=Hahella chejuensis (strain KCTC 2396) GN=clpP PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25
Identity = 64/160 (40.00%), Postives = 99/160 (61.88%), Query Frame = 3
Query:  258 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            P V+ +T  GE S+   D+++ L +ER+IF+   +++  +N ++A +L+L+S +  K ++LYIN PGG VT  L+IY TMQ +K  V T C+G A  +   LL+GG  G R  +P SR+ +  P  G  +GQA DI   A E+L +R+ +   LS+ TGQ
Sbjct:   12 PMVVEQTARGERSY---DIYSRLLKERIIFLVGQVEDHMANLVVAQLLFLESENPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQAASMGALLLSGGAAGKRYCLPHSRVMIHQPLLGGLQGQASDIEIHAKEILLLREKLNNILSKHTGQ 168          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBM (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=clpP PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25
Identity = 58/151 (38.41%), Postives = 94/151 (62.25%), Query Frame = 3
Query:  282 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            GE S+   D+++ L ++R+I + + +++  ++ I+A +L+L++ D  K ++LYIN PGG +T  +AIY TMQ +K  V T CVG A  +  FLL  G KG R A+P S + +  P G  +GQA DI   A+ +L ++  +   LS +TG+P
Sbjct:   14 GERSY---DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQPLGGFQGQATDIGIHAERILKMKKKLNTILSDRTGKP 161          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_BAUCH (ATP-dependent Clp protease proteolytic subunit OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=clpP PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25
Identity = 61/159 (38.36%), Postives = 102/159 (64.15%), Query Frame = 3
Query:  258 PKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            P V+ RT  GE S+   D+++ L +ER+IF+   +++  +N I+A M++L++ +  K +YLYIN PGG++T  ++IY TMQ +K  V T C+G A  +  FLLA G KG R  +P +R+ +  P G  +GQA DI+  A E+L V++ + + +++  G+
Sbjct:   16 PMVVERTLRGERSY---DIFSRLLKERIIFMTGKVEDYMANIIVAQMIFLEAENPEKDIYLYINSPGGNITSGMSIYDTMQFIKPNVSTFCMGQAASMGAFLLAAGTKGKRFCLPNARMMIHQPMGGFQGQATDIQIHAKEILKVKNRMNELMAKHIGK 171          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_TERTT (ATP-dependent Clp protease proteolytic subunit OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=clpP PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25
Identity = 57/150 (38.00%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  282 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            GE S+   D+++ L +ERVIF+   +++  +N ++A +L+L++ +  K ++LYIN PGG VT  ++IY TMQ +K  V T C+G A  +  FLL+ G  G R  +P +R  +  P+G A+GQA DI   A E+L +R  + + +++ TG+
Sbjct:   29 GERSY---DIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGSFLLSAGATGKRFCLPNARTMIHQPSGGAQGQASDIHIHAQEILKIRARLNEIMAKHTGK 175          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_BLOPB (ATP-dependent Clp protease proteolytic subunit OS=Blochmannia pennsylvanicus (strain BPEN) GN=clpP PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25
Identity = 56/142 (39.44%), Postives = 93/142 (65.49%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   I++  +N I+A M++L+S +  K ++LYIN PGG +T  ++IY T+Q ++  V T C+G A  ++ FLLA G KG R  +P +RI +  P G+ +GQA DI     E+L +++ I K +++ TGQ
Sbjct:   33 DIFSLLLKERIIFMTGTIEDSVANLIVAQMMFLESENSEKDIHLYINSPGGVITAGMSIYDTIQFVRPDVSTFCMGQAASMSAFLLASGTKGKRFCLPNARIMIHQPLGSFQGQATDIAIHTREILKIKNNINKLMAKHTGQ 174          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHK (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus thuringiensis subsp. konkukian GN=clpP1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 3
Query:  258 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            P V+ +T  GE S+   D+++ L ++R++ IG  I+++ ++ ++A +L+L++ D  K ++LYIN PGG  T   AI  TM  +K  V T C+GFA      LL  G KG R A+P S I +  P G A+GQA +I   A  +L ++  I K ++ KTGQP
Sbjct:    5 PYVVEQTKLGERSY---DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQP 161          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_BACAN (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus anthracis GN=clpP1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 3
Query:  258 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            P V+ +T  GE S+   D+++ L ++R++ IG  I+++ ++ ++A +L+L++ D  K ++LYIN PGG  T   AI  TM  +K  V T C+GFA      LL  G KG R A+P S I +  P G A+GQA +I   A  +L ++  I K ++ KTGQP
Sbjct:    5 PYVVEQTKLGERSY---DIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQP 161          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PSEE4 (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas entomophila (strain L48) GN=clpP PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25
Identity = 56/142 (39.44%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ERVIF+   +++  +N ++A +L+L++ +  K ++LYIN PGG VT  ++IY TMQ +K  V T C+G A  +  FLLA G  G R  +P SR+ +  P G  +GQA DI   A E+L ++  + + L+  TGQ
Sbjct:   35 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAAGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAHHTGQ 176          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PEDPA (ATP-dependent Clp protease proteolytic subunit OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=clpP PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25
Identity = 57/143 (39.86%), Postives = 89/143 (62.24%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            D+++ L ++R+I +   ID++ +N I++ +L+LD+ D  K +YLYIN PGG VT  LAIY TM  +KS V T  +G A  +A  L + G KG R A+P S + +  P+G A+GQ  +I   A+++L  R  +   L+  +GQP
Sbjct:   19 DIYSRLLKDRIIMLSGPIDDDLANSIISQLLFLDAQDSEKDIYLYINSPGGVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPHSEVMIHQPSGGAQGQQTEIEIAAEQILKTRKELNTILAENSGQP 161          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_LACRJ (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus reuteri (strain JCM 1112) GN=clpP PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25
Identity = 56/143 (39.16%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            D+++ L ++R+I +   I++E +N I+A +L+LD+ D +K +YLYIN PGG VT  +AIY TM  +K+ V T  +G A  +A  L++ G KG R  +P S++ +  P+G A+GQ  +I   A E+L  R  +   L++ +GQP
Sbjct:   19 DIYSRLLKDRIIMLSGPIEDEMANSIVAQLLFLDAQDSTKDIYLYINSPGGVVTSGMAIYDTMNFIKADVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQVLIHQPSGGAQGQQTEIEIAATEILKTRKMLNGILAKNSGQP 161          
The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_HAHCH1.320e-2540.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBM1.320e-2538.41ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BAUCH1.320e-2538.36ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_TERTT1.724e-2538.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BLOPB1.724e-2539.44ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACHK1.724e-2538.75ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_BACAN1.724e-2538.75ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PSEE42.251e-2539.44ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PEDPA2.251e-2539.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LACRJ2.251e-2539.16ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bp
GGGGGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAAACATGTCCGTT
TCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTCAAGCT
TTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGGGAAAC
CTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCC
GGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATGCCGAT
TGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAAT
GGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGG
CAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTA
TCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTC
CCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGNNACTATGCAGAGC
TTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGC
AGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTC
TTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCT
GATGACATTCGTAATGAAGCAGATGAGCTTCTTGGAGTCAGAGATTACAT
TTTCAAGGAGTTGTCTAGGAAAACAGGTCAGCCCTTTG
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