DR405251

Overview
NameDR405251
Unique NameDR405251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_YERP3 (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 61/159 (38.36%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  258 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            P V+ +T  GE S+   D+++ L +ER+IF+   +++  +N I A ML+L++ +  K ++LYIN PGG +T  ++IY TMQ +K  V T C+G A  +  FLL  G KG R  +P SR+ +  P G  +GQA DI   A E+L V+  + + ++  TG+
Sbjct:   18 PMVVEQTSRGERSY---DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGK 173          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XYLFT (ATP-dependent Clp protease proteolytic subunit OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XYLFA (ATP-dependent Clp protease proteolytic subunit OS=Xylella fastidiosa GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XYLF2 (ATP-dependent Clp protease proteolytic subunit OS=Xylella fastidiosa (strain M23) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAENPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANOR (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANOP (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANOM (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANCP (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANCB (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris (strain B100) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_XANC8 (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris (strain 8004) GN=clpP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            D+++ L +ER+IF+   ID+  +N I+A +L+L++ +  K + +YIN PGG VT  +AIY TMQ +K  V T CVG A  +   LLA G  G R A+P SR+ +  P G  +GQA DI   A E+L +R  + + L++ TGQ
Sbjct:   26 DIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQ 167          
The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_YERP38.554e-2538.36ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XYLFT8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XYLFA8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XYLF28.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOR8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOP8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANOM8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANCP8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANCB8.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_XANC88.554e-2542.25ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bp
GGGGGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAAACATGTCCGTT
TCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTCAAGCT
TTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGGGAAAC
CTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCC
GGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATGCCGAT
TGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAAT
GGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGG
CAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTA
TCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTC
CCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGNNACTATGCAGAGC
TTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGC
AGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTC
TTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCT
GATGACATTCGTAATGAAGCAGATGAGCTTCTTGGAGTCAGAGATTACAT
TTTCAAGGAGTTGTCTAGGAAAACAGGTCAGCCCTTTG
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