DR405251

Overview
NameDR405251
Unique NameDR405251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_LIRTU (ATP-dependent Clp protease proteolytic subunit OS=Liriodendron tulipifera GN=clpP PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N LYRER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P ++IY TMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +       +   EA+ELL +R+ + +   ++TG P
Sbjct:    1 MPIGVPKVPFRSPGEEDAIWVDVFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_DRIGR (ATP-dependent Clp protease proteolytic subunit OS=Drimys granadensis GN=clpP PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 72/165 (43.64%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P +AIY TMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +       +   EA+ELL +R+ + +   ++TG P
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ANGEV (ATP-dependent Clp protease proteolytic subunit OS=Angiopteris evecta GN=clpP PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.910e-34
Identity = 73/165 (44.24%), Postives = 108/165 (65.45%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R PGE    WVD+ N LYRER++F+GQ +D+E +NQ++  M+YL+  D+++ +YLYIN PGG V P +++Y  MQ +   V T C+G A  +   +L GGE   R A+P +R+ +  PA +   GQA +   EA+E+L +RD I K   ++TG+P
Sbjct:    1 MPIGVPKVPFRLPGEEDAVWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDETQDMYLYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSSILTGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKP 164          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PINCO (ATP-dependent Clp protease proteolytic subunit OS=Pinus contorta GN=clpP PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34
Identity = 69/165 (41.82%), Postives = 104/165 (63.03%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MP+G PKV +R PG+    WVDL+N LYRER++F+ Q+I+ E +NQ++  M+YL + D +K ++ +IN PGG V P + +Y  MQ++   V T C+G A  +  F+L GGE   R A+P +R+ +  PA +   G A D  NE+  +  VR+YI +    +TGQP
Sbjct:    1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_MESVI (ATP-dependent Clp protease proteolytic subunit OS=Mesostigma viride GN=clpP PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.317e-33
Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQ 731
            MPIG PKV YR PGE    +VD++N LYRER++F+G+++D+E +NQ++  M++L+S DD+K ++ YIN PGG +   L +Y  +Q +   V T C+G A  +A F+LAGG  G R   P +R+ L  P G   G+A  +  E+ E+  +R+ I     ++TGQ
Sbjct:    1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQ 163          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_AMBTC (ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda GN=clpP PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.317e-33
Identity = 73/165 (44.24%), Postives = 104/165 (63.03%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MP+G PKV +R+PGE    WVD++N L+RER++F+GQ ++ E SNQI+  M+YL   DD++ +YL+IN PGG V P +AIY  MQ +   V T C+G A  +  F+LAGGE   R A P +R+ +  PA +     A +   EA ELL +R+ I     ++TG P
Sbjct:    1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_CITSI (ATP-dependent Clp protease proteolytic subunit OS=Citrus sinensis GN=clpP PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 70/165 (42.42%), Postives = 106/165 (64.24%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARG-QADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV YR+PG+    WVD++N LYRER++F+GQ ++ + SNQ++  M+YL   +++K +YL+IN PGG V P +AIY TMQ ++  V T C+G A  +  FLLA G    R A P +R+ +  P GA  G Q  +   + +ELL +R+ +     +++G+P
Sbjct:    1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHARVMIHQPIGAFYGAQTGEFILDTEELLRLREILTMVYVQRSGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_CHLSC (ATP-dependent Clp protease proteolytic subunit OS=Chloranthus spicatus GN=clpP PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD+ N L+RER++F+GQ +D E SNQ++  M+YL   DD++ +YL+IN PGG V P L IY TMQ +   V T C+G A  +  F+L GGE   R A P +RI +  PA +    QA +   EA+ELL +R+ + +   ++TG P
Sbjct:    1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNP 164          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.933e-33
Identity = 70/165 (42.42%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKVL+ +PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D ++  +L+IN PGG V P + +Y TMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKP 165          
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.933e-33
Identity = 70/165 (42.42%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734
            MPIG PKV +R+PGE    WVD++N L+RER++F+GQ +D E SNQ++  M+YL   D ++  +L+IN PGG V P + +Y TMQ +   V T C+G A  +  F+L GGE   R A P +R+ +  PA +    QA +   EA+ELL +R+ + +   ++TG+P
Sbjct:    1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKTRDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKP 165          
The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_LIRTU4.525e-3443.64ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DRIGR4.525e-3443.64ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANGEV5.910e-3444.24ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PINCO7.719e-3441.82ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MESVI1.317e-3341.72ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AMBTC1.317e-3344.24ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CITSI1.720e-3342.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLSC1.720e-3345.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOGR2.933e-3342.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACOCL2.933e-3342.42ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240O01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240O01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bp
GGGGGACCAAACCAGTTGCAGTTCACTCTCTCGCGCTAAACATGTCCGTT
TCGCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTCAAGCT
TTTTTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGGGAAAC
CTAATTTGAGTGCTGAATTCTATGGCAGAGTTCATAAGAGCCTCTACTCC
GGCATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATGCCGAT
TGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTGGCAAT
GGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCATTGGG
CAAAATATAGATGAAGAATTTAGCAACCAAATATTGGCAACGATGTTGTA
TCTAGACAGTGTTGATGATTCCAAAAGGGTTTATTTGTACATCAATGGTC
CCGGTGGGGATGTTACTCCCACCTTGGCAATTTACGNNACTATGCAGAGC
TTGAAGAGTCCTGTTGGCACTCACTGTGTGGGCTTTGCCTATCATTTAGC
AGGGTTTCTTCTAGCAGGTGGAGAAAAGGGTAATCGGTCTGCAATGCCTC
TTTCGAGAATTGCTTTAGACTCTCCAGCTGGTGCAGCTCGTGGTCAGGCT
GATGACATTCGTAATGAAGCAGATGAGCTTCTTGGAGTCAGAGATTACAT
TTTCAAGGAGTTGTCTAGGAAAACAGGTCAGCCCTTTG
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