DR405251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNPX (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain WH8102) GN=clpP2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33 Identity = 69/143 (48.25%), Postives = 98/143 (68.53%), Query Frame = 3 Query: 306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +YLYIN PGG V L I+ TMQ +K V T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + +ELS +TGQP Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNQELSDRTGQP 159
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PIPCE (ATP-dependent Clp protease proteolytic subunit OS=Piper cenocladum GN=clpP PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33 Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL D ++ +YL+IN PGG V P +AIY TMQ + V T C+G A + F+L GGE R A P + + + PA + + EA+ELL +R+ + + ++TG P Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGTRDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHAWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNP 165
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_PINTH (ATP-dependent Clp protease proteolytic subunit OS=Pinus thunbergii GN=clpP PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33 Identity = 68/165 (41.21%), Postives = 103/165 (62.42%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +K ++ +IN PGG V P + ++ MQ++ V T C+G A + F+L GGE R A+P +RI + PA + G A D NE+ + +RDYI + +T QP Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSNKDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPHARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQP 165
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_DIOEL (ATP-dependent Clp protease proteolytic subunit OS=Dioscorea elephantipes GN=clpP PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32 Identity = 74/165 (44.85%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +K +YL+IN PGG V P +AIY TMQ + V T C+G A + +L GGE R A P +R+ + PA + QA + EA+ELL +R+ + K ++TG P Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDNEVSNQLVGLMVYLSIEDATKDLYLFINSPGGWVIPGMAIYDTMQFVSPDVHTICMGLAASMGSLILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNP 164
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMT (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32 Identity = 67/143 (46.85%), Postives = 98/143 (68.53%), Query Frame = 3 Query: 306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 D+++ L RER++F+G+ + + +N+I+A +L+L++ D K ++LYIN PGG V L I+ TMQ +K + T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L ++D + KELS +TGQP Sbjct: 17 DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMIHQPLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQP 159
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32 Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 306 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +YLYIN PGG V L I+ TMQ +K V T CVG A + FLL G KG RS++ SRI + P G A GQA DIR +ADE+L ++D + ELS +TGQP Sbjct: 17 DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQP 159
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32 Identity = 68/150 (45.33%), Postives = 101/150 (67.33%), Query Frame = 3 Query: 288 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +Y+YIN PGG V L I+ TMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ + Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDY 160
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_SORBI (ATP-dependent Clp protease proteolytic subunit OS=Sorghum bicolor GN=clpP PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 72/166 (43.37%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_SHEAM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpP PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 3 Query: 258 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLGVRDYIFKELSRKTGQP 734 P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S + K +YLYIN PGG VT +AIY TMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+LG++ + + LS TGQP Sbjct: 14 PMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESENPDKEIYLYINSPGGSVTAGMAIYDTMQFIKPKVSTVCIGQACSMGAFLLAGGEKGMRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHTGQP 170
BLAST of DR405251 vs. ExPASy Swiss-Prot
Match: CLPP_SACOF (ATP-dependent Clp protease proteolytic subunit OS=Saccharum officinarum GN=clpP PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32 Identity = 72/166 (43.37%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 243 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYLYINGPGGDVTPTLAIYXTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLGVRDYIFKELSRKTGQPF 737 MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D + ++L+IN PGG + +AI+ TMQ++ + T C+G A +A F+L GGE R A P +RI L PA A R + + E +EL VR+ I + + +TG+PF Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPF 166 The following BLAST results are available for this feature:
BLAST of DR405251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405251 ID=DR405251; Name=DR405251; organism=Citrus sinensis; type=EST; length=738bpback to top |