DR405226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 683 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P Sbjct: 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 178
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 683 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P Sbjct: 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 178
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 683 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P Sbjct: 53 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 172
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 683 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P Sbjct: 53 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 172
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 330 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 692 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNT 150
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 330 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 692 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNT 150
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 689 M++ A L + K L + P G S G + NI W+ I GP DT ++GG F + F ++YPN PPTVRF S M+HPN+Y+DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN Sbjct: 1 MASQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPAN 137
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 51/122 (41.80%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 333 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPAN 689 +R RL +++K +Q++ A I D NI W A+I GP +TP++GG F+L E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP N Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 330 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 692 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+ +WS +YDV IL SIQSLL +PN +SP N+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNT 150
BLAST of DR405226 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 321 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 683 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P Sbjct: 45 LSTSA-KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADP 164 The following BLAST results are available for this feature:
BLAST of DR405226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405226 ID=DR405226; Name=DR405226; organism=Citrus sinensis; type=EST; length=692bpback to top |