DR405133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15 Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 151 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 654 K V +G+ AVGK+ +++ + F T+ F + +V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ ++ AK W+ EL R +P + I L G K DL + + + A A L +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAY----ADDNSL-------LFMETSAKTAMNVNDLFLAIAK 179
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15 Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 151 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 651 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ I T +G L + +G + E S+K +V+ F+ + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VIPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLV 180
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.517e-15 Identity = 49/172 (28.49%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 148 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 654 +K + +G+ VGK+ +++ + + F + T+ +F ++ +DG+ V L +WDTAGQE + L P YRGA + + + S++S+E + W+ E+ Y II +V K+D+ P V +T +G + K ++IE S+KT++ V+ F+ I+ Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNIIKMMVANKIDM----------PNRV-VTREEGLKFAKR-HRTLFIEASAKTKEGVQCTFEELIE 170
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 46/172 (26.74%), Postives = 92/172 (53.49%), Query Frame = 1 Query: 148 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 654 +K + +G+ VGK+ +L+ +T +TF + T+ +F + +DG+ L +WDTAGQE + L P YRGA +L + + + ++ + + W+ EL Y ++ LVG K+D +D+++ + +G + + + ++IE S+KT+ V+ F+ ++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKID-KDNRE----------VDRNEGLKFARK-HSMLFIEASAKTRDGVQCAFEELVE 167
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RB18A_LYMST (Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 51/172 (29.65%), Postives = 90/172 (52.33%), Query Frame = 1 Query: 148 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 654 +K + +G+ VGK+ +L+ +T +TF + T+ +F + V+G+ L +WDTAGQE + L P YRGA +L + + SK S+ N W+ EL ++ ++ LVG K+D A+H +T +G + + ++IE S+KT V+ F+ ++ Sbjct: 10 LKILIIGESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVSSKQSF-NKLDAWLNELETFSTKHDMVKMLVGNKID-------RANH----EVTKDEGLKFARK-HHMLFIEASAKTNDGVQCAFEELVE 168
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 142 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 639 R K V +G G VGK+ + + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VP+ILVG K DL D++ + QG+ L + ++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 142 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 639 R K V +G G VGK+ + + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VP+ILVG K DL D++ + QG+ L + ++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 1 Query: 151 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 654 K V +G+ AVGK+ +++ + F T+ F + +V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ ++ AK W+ EL R +P + I L G K DL + + A A L +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAY----ADDNSL-------LFMETSAKTAMNVNDLFLAIAK 179
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 151 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 639 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162
BLAST of DR405133 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 54/165 (32.73%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 151 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 639 K + +G GK+C+L + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAF 162 The following BLAST results are available for this feature:
BLAST of DR405133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR405133 ID=DR405133; Name=DR405133; organism=Citrus sinensis; type=EST; length=657bpback to top |