DR405114

Overview
NameDR405114
Unique NameDR405114
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H33_CAPAN (Histone H3.3 OS=Capsicum annuum PE=2 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 9.600e-63
Identity = 124/136 (91.18%), Postives = 124/136 (91.18%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 9.600e-63
Identity = 124/136 (91.18%), Postives = 124/136 (91.18%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H33A_LILLO (Histone H3.3a OS=Lilium longiflorum GN=MPH3 PE=2 SV=3)

HSP 1 Score: 235.343 bits (599), Expect = 1.811e-61
Identity = 121/136 (88.97%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQD+K DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDYKADLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_ACRFO (Histone H3 OS=Acropora formosa PE=3 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 5.268e-61
Identity = 121/136 (88.97%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAAAKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_URECA (Histone H3 OS=Urechis caupo PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_TIGCA (Histone H3 OS=Tigriopus californicus PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_PLADU (Histone H3 OS=Platynereis dumerilii PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_DROME (Histone H3 OS=Drosophila melanogaster GN=His3 PE=1 SV=4)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_DROHY (Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of DR405114 vs. ExPASy Swiss-Prot
Match: H3_CHITH (Histone H3 OS=Chironomus thummi thummi PE=3 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 8.986e-61
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   79 MARTKQTARKSTGGKAPRKQLXXXXXXXXXXXXGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 486
            MARTKQTARKSTGGKAPRKQL            GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of DR405114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
H33_CAPAN9.600e-6391.18Histone H3.3 OS=Capsicum annuum PE=2 SV=3[more]
H33_ARATH9.600e-6391.18Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 ... [more]
H33A_LILLO1.811e-6188.97Histone H3.3a OS=Lilium longiflorum GN=MPH3 PE=2 S... [more]
H3_ACRFO5.268e-6188.97Histone H3 OS=Acropora formosa PE=3 SV=2[more]
H3_URECA8.986e-6188.24Histone H3 OS=Urechis caupo PE=1 SV=2[more]
H3_TIGCA8.986e-6188.24Histone H3 OS=Tigriopus californicus PE=3 SV=2[more]
H3_PLADU8.986e-6188.24Histone H3 OS=Platynereis dumerilii PE=3 SV=2[more]
H3_DROME8.986e-6188.24Histone H3 OS=Drosophila melanogaster GN=His3 PE=1... [more]
H3_DROHY8.986e-6188.24Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2[more]
H3_CHITH8.986e-6188.24Histone H3 OS=Chironomus thummi thummi PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240G18 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240G18 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405114 ID=DR405114; Name=DR405114; organism=Citrus sinensis; type=EST; length=610bp
GGGGGAATTTCTTTCCGTCATTAAGGCGTTGCATTCAGATCTGTGCATTT
TNNNGNNTGTGTTTGTGATTAAAGAGTAATGGCCCGTACGAAGCAAACCG
CGCGCAAGTCAACTGGAGGAAAGGCTCCGAGGAAGCAGCTCGCCACAAAG
GCTGCAAGAAAACCTGCTCCAACAACTGGTGGAGTCAAGAAGCCTCATCG
TTACCGTCCTGGAACTGTCGCCCTCCGTGAAATCCGCAAATATCAGAAGA
GCACTGAGCTTTTGATCCGCAAGCTGCCTTTTCAGCGGCTGGTTCGTGAA
ATTGCTCAAGATTTCAAGACAGATTTGAGGTTCCAAAGCCACGCGGTTCT
TGCGCTGCAGGAAGCGGCAGAGGCTTATCTCGTGGGTCTGTTCGAGGACA
CCAACCTTTGTGCTATCCATGCCAAGCGAGTCACCATTATGCCCAAGGAT
ATTCAACTGGCAAGGCGAATCCGAGGCGAGCGTGCTTAATTTGTGATTCC
TTATGTAGTCGTCAGTTTCCTATTTAGTTTGCTAGTTTTTCTTTATTCCG
GTTTTTACATGTAAAGAATGATATGATGGATTGAAGAATATTTGGAATTT
GATATTTGTT
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